Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g03015 ATGTTCACATCCAGCTACTTGAACAGCAACGGCAATAGCAACAGCGACAGTTCCATCCTCACCGTCAGCGGCGGCGGAAGGTTCTGGTTAATGGCTGCGGCGATGACGCCGTCGAATTCGGCGGTGGTGTTCACGGCCTTGGCTGGATTTGCTATTGTGGCTGTGATTTTCTACGGTGCCAGTAGACGAAGCCACAATTCATCTTCGTCGTCTTCAAATTCCTCTCCTTCTTCATCGTCGTCATCATCGTCGTGGATCCATTTGCGTTCGGTTCTTTTCGTTGTCACTTCTTCCTCaccagcttcttcttcttcacccTCTGATCGgGGTAGGCTTAAATCACCATGGTCTCGCAGGAAAAGGAAACATGCCCTTTCACCTCAGCAGTGGAGAAGCTTGTTTACACAAGATGGGAGACTCCGGGATGGTGGAACAAAATTCTTGAAAAGAGTTCGCAGTGGAGGTGTTGATCCTAGCATAAGGGCTGAAGTTTGGCCATTCCTACTTGGAGTATATAACTTGGACAGCTCCAAAGAGGAAAGAGATgttataaaaacaaagaatagAAAGCAATATGAGAAGCTCCGTAGACAAAGCCGCCAAATTCTAAAGCACAGCTATGGGAGCTTTAAGTCAAGTGAAATTGGTGAAATCAGCTATGAAGGAGATAGTGGGAGTCTTATTCGAGACTTTGGTTCCCCTAGTTCTGATGATGTAGACAGTGCTAGGGAATCCCTTTCTAGTGAGGAAAGGAGCCCAGGTGTTGAATACTCAGATGATCCATCCAGTGCATTGTTGGAAGGAGATGATATTTTGAATGCCAATAATGCTGATGCCTCTGCATTGGATACTGATTCCTCTGATTCAGACTCTTCAGAAGGTCCTGAGGTAATTCAAACTTCCCCCTCTGCTGACGGTCAAGAAGAGATTGATCCCAAGGCAGCTTCAAAGGAAGACTCTTCTCCCTCCCTGCCATCAAAACTAAGAAATGATGAAGATTTTTCTACTTGGCAACGAATTATCCGACTTGATGCAGTACGTGCCAATGCAGAATGGGTGTCATTCTCTCCCTCTCAAGCTGCTGTATCAGAGAATAGGGCACGCCGTTCTGCCGAGGCTGTTGGCTTGAAGGATTATGGTCACCTAGAGCCCTGCAGAATCTTCCATGCTGCCCGACTAGTTGCCATTCTTGAAGCATATGCACTATATGACCCTGAAATTGGCTACTGTCAGGGTATGAGTGATTTACTTTCTCCTATGATTTCTGTTATATCAGAGGATCATGAGGCTTTCTGGTGTTTTGTTGGATTCATGAAGAAGGCAAGGCAGAATTTTAGGCTTGATGAGGTGGGTATTAGGAGGCAACTGAACATTGTTgcaaaaattatcaaatttaaggACTCCCAACTGTATAGGCATCTGGAGAAGCTCCAGGCTGAGGattgcttttttgtttataggaTGGTGGTGGTACTTTTTAGAAGGGAATTGACATTTGAACAAACTCTTTGCCTCTGGGAAGTAATGTGGGCGGATCAGGCTGCAATTAGGGCAGGTATTGGAAAATCTGCATGGAGCAGAATAAGGCTGCGAGCTCCACCAACAGATGAGTTATTGCTTTATGCAATAGCGGCTTCGGTGTTGCAGAGAAGGAAATTGATTATTGAGAAGTACAGCAGCATGGATGAAATTATTAGGGAATGCAATGGCATGGCTGGGCAACTTGATGTATGGAAGCTGCTCGATGATGCGCATAACTTGGTGGTCACCCTTCATGACAAAATAAAGACATCGCTCCGGTA 1802 0.4412 MFTSSYLNSNGNSNSDSSILTVSGGGRFWLMAAAMTPSNSAVVFTALAGFAIVAVIFYGASRGRLKSPWSRRKRKHALSPQQWRSLFTQDGRLRDGGTKFLKRVRSGGVDPSIRAEVWPFLLGVYNLDSSKEERDVIKTKNRKQYEKLRRQSRQILKHSYGSFKSSEIGEISYEGDSGSLIRDFGSPSSDDVDSARESLSSEERSPGVEYSDDPSSALLEGDDILNANNADASALDTDSSDSDSSEGPEVIQTSPSADGQEEIDPKAASKEDSSPSLPSKLRNDEDFSTWQRIIRLDAVRANAEWVSFSPSQAAVSENRARRSAEAVGLKDYGHLEPCRIFHAARLVAILEAYALYDPEIGYCQGMSDLLSPMISVISEDHEAFWCFVGFMKKARQNFRLDEVGIRRQLNIVAKIIKFKDSQLYRHLEKLQAEDCFFVYRMVVVLFRRELTFEQTLCLWEVMWADQAAIRAGIGKSAWSRIRLRAPPTDELLLYAIAASVLQRRKLIIEKYSSMDEIIRECNGMAGQLDVWKLLDDAHNLVVTLHDKIKTSLR 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g03015 553 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 9 548 - -
Bva06g03015 553 MobiDBLite consensus disorder prediction 233 259 - -
Bva06g03015 553 Pfam Rab-GTPase-TBC domain 345 465 IPR000195 -
Bva06g03015 553 ProSiteProfiles TBC/rab GAP domain profile. 108 466 IPR000195 -
Bva06g03015 553 MobiDBLite consensus disorder prediction 233 283 - -
Bva06g03015 553 MobiDBLite consensus disorder prediction 195 209 - -
Bva06g03015 553 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 89 426 IPR035969 -
Bva06g03015 553 MobiDBLite consensus disorder prediction 179 220 - -
Bva06g03015 553 SMART tbc_4 105 484 IPR000195 -
Bva06g03015 553 Gene3D - 402 549 - -
Bva06g03015 553 PANTHER SMALL G PROTEIN SIGNALING MODULATOR 2-LIKE ISOFORM X1 9 548 - -
Bva06g03015 553 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 403 541 IPR035969 -
Bva06g03015 553 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 266 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g03015 Bva-Chr6 18740977 18745321 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g03015 - - gmx:100789579 839.336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01907 12 15264052 15268273 Bva06g03015 06 18740977 18745321 ECH
Bva06g03015 06 18740977 18745321 Bva06g03015 06 18740977 18745321 ECH