Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01899 ATGGGGATTGCTGGAGATCACAACAAAcatcatttgaattttcatcttcatatCCCTCACTTCCATTTTCACCAACAAGATCACCAGAAGAAGGGTCTGAAGGGCATCCCAAAAGGGTGTTTGGCAATCTTGGTGGGTCAAGGAGAGGAACAGCAAAGGTTTGTGATCCCTGTCATCTACATCAACCATCCACTCTTCATGCAATTGTTGAAGGAAGCTGAAGAAGAATATGGCTTTGATCAGAAGGGTCCCATCACCATTCCCTGCCACGTGGAAGAGTTTCGCACCGTCCAAGGCATGATTGATCAAGAGCAGCACTCTCACCATCATCACCACCACAACCATCATCATGTTTGGTGCTTCAAAGTATG 371 0.4394 MGIAGDHNKHHLNFHLHIPHFHFHQQDHQKKGLKGIPKGCLAILVGQGEEQQRFVIPVIYINHPLFMQLLKEAEEEYGFDQKGPITIPCHVEEFRTVQGMIDQEQHSHHHHHHNHHHVWCFKV 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01899 123 Pfam Auxin responsive protein 34 99 IPR003676 GO:0009733
Bva12g01899 123 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 11 115 IPR003676 GO:0009733
Bva12g01899 123 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 11 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01899 Bva-Chr12 15234238 15235152 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01899 36 95 Calmodulin-binding Proteins AT5G20810 56.667 3.91e-18 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01899 K14488 - jre:108992269 173.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01899 12 15234238 15235152 Bva06g03022 06 18769810 18770569 ECH
Bva12g01899 12 15234238 15235152 Bva12g01899 12 15234238 15235152 ECH