Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g03022 ATGGGGAATATTGCCGGAGATCATCACAATAAGCACCATTTGAATTTGCATCTTCATATCCCGCACCTCCATTGTCACCAACATGATCAACTGAAGAAGGATCTGAAGGACATCCCAAAAGGGTGTCTGGCAATCTTGGTGGGTCAAGGAGAGGAGCAACAAAGGTTCGTGATCCCTGTGATTTACATGAACCACCCACTTTTCATGCAATTGTTGAAGGAAGCTGAAGAAGAATATGGCTTTGATCAGAAAGGACCCATCACCATTCCCTGCCACGTGGAAGAGTTCCGTACCGTCCAAGGCTTGATTGATCAGGAGCAGCAGCACTCTCACCATCATCACCATGACCACcagcatcatcatcatcatcatgttTGGTGCTTCAAAGAATG 392 0.4388 MGNIAGDHHNKHHLNLHLHIPHLHCHQHDQLKKDLKDIPKGCLAILVGQGEEQQRFVIPVIYMNHPLFMQLLKEAEEEYGFDQKGPITIPCHVEEFRTVQGLIDQEQQHSHHHHHDHQHHHHHHVWCFKE 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g03022 130 PANTHER - 12 125 - -
Bva06g03022 130 Pfam Auxin responsive protein 32 99 IPR003676 GO:0009733
Bva06g03022 130 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 12 125 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g03022 Bva-Chr6 18769810 18770569 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g03022 37 97 Calmodulin-binding Proteins AT5G20810 57.377 1.57e-19 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g03022 K14488 - gmx:100526867 164.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01899 12 15234238 15235152 Bva06g03022 06 18769810 18770569 ECH
Bva06g03022 06 18769810 18770569 Bva06g03022 06 18769810 18770569 ECH