Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01876 ATGGAAACAAAGGTACTGTCATCCGGAATCCGGCACTCAAACCTACCAGAGAGTTATGTCCGGCCAGAATCCGAGCGACCTCGTCTCTCCGAAGTGTCTTTATGCGAAGACGTTCCGGTCATCGACTTGGGTTCTCCGGACAGAACCCAGACTGTCCGACACATTGGTGAAGCCTGCAGGTGTTACGGCCTTTTCCAGGTAATAAATCATGGGGTGCCATTGGAGGCAGTGAACAAAATGGCAGAGGTGGCATCTGAGTTCTTTAAGCTGCCTGTGGAGGAGAAGCTGAAGCTGTACTCCGATGACCCTTCGAAGACAATGAGACTTTCGACCAGTTTCAATGTGAACAAGGAGAAGGTGCATAATTGGAGAGACTACCTTCGGCTCCATTGTTATCCTCTTGAAAAGTATGTGCCCGAGTGGCCTTCTAATCCTCCTTCGTTCAAAGAAATTGTGAGAAACTACTGCATTCAAGTTCGGGAACTAGGATTCAGAATCGAAGAATATATATCGGAGAGTCTTGGCCTAGAAAAAGATCACATAAAGAACGTTTTAGGACAACAAGGGCAGCATATGGCAGTGAACTTCTATCCCCCATGCCCTGAACCAGAGCTCACTTATGGATTGCCCGGACACACAGACCCAAATGCACTCACAATTCTACTCCAGGACCTGCAAGTTTCTGGCCTCCAAGCTCTCAAAGACGGCAAGTGGGTTGCCATCAATCCCCAACCCAATGCATTTGTCATTAACCTTGGCGATCAATTACAGGCACTGAGCAATGGGATCTATAAGAGTGTTTGGCACCGGGCTGTGGTGAACACTGATAACCCAAGGCTTTCCGTGGCTTCATTTCTTTGCCCGGAGGACCACGCTTTGATCAGCCCAGCAAAACCACTCACACAAGATGGATGTGCAGCCATATACAGGGACTTCACGTATGCAGAGTATTATAGCAAGTTCTGGGGAAGGAACTTGGACCAAGAGCACTGTCTCGAACTTTTCAAGGCTTA 1013 0.4827 METKVLSSGIRHSNLPESYVRPESERPRLSEVSLCEDVPVIDLGSPDRTQTVRHIGEACRCYGLFQVINHGVPLEAVNKMAEVASEFFKLPVEEKLKLYSDDPSKTMRLSTSFNVNKEKVHNWRDYLRLHCYPLEKYVPEWPSNPPSFKEIVRNYCIQVRELGFRIEEYISESLGLEKDHIKNVLGQQGQHMAVNFYPPCPEPELTYGLPGHTDPNALTILLQDLQVSGLQALKDGKWVAINPQPNAFVINLGDQLQALSNGIYKSVWHRAVVNTDNPRLSVASFLCPEDHALISPAKPLTQDGCAAIYRDFTYAEYYSKFWGRNLDQEHCLELFKA 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01876 337 Gene3D - 3 319 IPR027443 -
Bva12g01876 337 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 1 336 - -
Bva12g01876 337 PANTHER PROTEIN DOWNY MILDEW RESISTANCE 6 1 336 - -
Bva12g01876 337 Pfam non-haem dioxygenase in morphine synthesis N-terminal 38 142 IPR026992 -
Bva12g01876 337 Pfam 2OG-Fe(II) oxygenase superfamily 190 288 IPR044861 -
Bva12g01876 337 SUPERFAMILY Clavaminate synthase-like 12 327 - -
Bva12g01876 337 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 188 288 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01876 Bva-Chr12 15124277 15127568 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01876 37 336 Glycosyltransferase AT5G59530 34.921 1.11e-48 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01876 K24028 - gmx:100782253 590.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01876 12 15124277 15127568 Bva06g03050 06 18897372 18902652 ECH
Bva12g01876 12 15124277 15127568 Bva12g01876 12 15124277 15127568 ECH