Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g03050 ATGTGCTCGTCTTCCACGAAGCTACCCAGTCTAAACAGGGAGGTAGGGGTTATGTACACAAAGGTGTTGTCCTCCGGAATCCAGTACTCAAACCTGCCGGAGAGTTATGTCCGGCCAGAATCCGAGCGACCACGTCTCTCTGAAGTCTCTTCATGTGAAGATGTTCCGGTCATCGACTTGAGTTCTCTAAACAGAGCCCAGATTGTACAACAAATTGGCGAAGCTTGCAGGTCTCACGGCGTTTTccagGCAATAAATCACGGGGTGCCTTTGGAGGCAGTGGACAAAATGGCAGGGATAGCATCAGAGTTCTTTAAGCTGCCAGTAGAAGAGAAACTCAAATTGTATTCAGATGACCCATCAAAGACAACGAGACTTTCTACTAGTTTCAATGTGAAGAAGGAGAAGGTTCATAACTGGAGAGACTACCTTAGGCTCCACTGTTATCCTCTGGACAAGTATGTACCTGAGTGGCCCTCCAATCCTACTTCGTTCAAGGAAATTGTGAGAAAGTACTGTATGGAAGTTCGGGAACTGGGACTCAGAATAGAAGAACTCATATCAGAGAGTCTTGGCCTAGAAAAAGATTACATAAAGAACGTTTTAGGGCAACAAGGGCAGCATATGGCGGTGAACTTCTATCCCCCATGCCCTGAGCCAGAACTCACTTATGGATTGCCAGGACACACTGACCCAAATGCACTCACAATTCtactccaagacctacaaGTTTCTGGCCTTCAAGTTCTCAAAGACGGCAAGTGGGTTGCCATTAGTCCTCACCCCAATGCATTTGTCATCAACATTGGCGATCAATTGCAGGCACTGAGCAATGGGATCTATAAGAGTGTTTGGCACCGGGCTGTTGTGAACAGTGACAAGCCAAGGCTTTCCGTTGCTTCATTTCTTTGCCCGGAGGACGAAGCTCTGATCAGCCCAGCAAAGCCACTCACACAAGATGGATGTGCAGCCATATACAGGGACTTCACTTATACAGAGTATTATAGCAAGTTTTGGAGTAGAAACTTGGATCAAGAGCACTGTCTGGAACTTTTCAAGACTAAGTA 1067 0.4564 MCSSSTKLPSLNREVGVMYTKVLSSGIQYSNLPESYVRPESERPRLSEVSSCEDVPVIDLSSLNRAQIVQQIGEACRSHGVFQAINHGVPLEAVDKMAGIASEFFKLPVEEKLKLYSDDPSKTTRLSTSFNVKKEKVHNWRDYLRLHCYPLDKYVPEWPSNPTSFKEIVRKYCMEVRELGLRIEELISESLGLEKDYIKNVLGQQGQHMAVNFYPPCPEPELTYGLPGHTDPNALTILLQDLQVSGLQVLKDGKWVAISPHPNAFVINIGDQLQALSNGIYKSVWHRAVVNSDKPRLSVASFLCPEDEALISPAKPLTQDGCAAIYRDFTYTEYYSKFWSRNLDQEHCLELFKTK 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g03050 355 Gene3D - 15 336 IPR027443 -
Bva06g03050 355 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 205 305 IPR005123 -
Bva06g03050 355 Pfam 2OG-Fe(II) oxygenase superfamily 207 305 IPR044861 -
Bva06g03050 355 Pfam non-haem dioxygenase in morphine synthesis N-terminal 55 159 IPR026992 -
Bva06g03050 355 PANTHER PROTEIN DOWNY MILDEW RESISTANCE 6 19 353 - -
Bva06g03050 355 SUPERFAMILY Clavaminate synthase-like 28 344 - -
Bva06g03050 355 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 19 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g03050 Bva-Chr6 18897372 18902652 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g03050 28 353 Glycosyltransferase AT5G59530 33.531 6.73e-52 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g03050 K24028 - zju:107414987 577.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01876 12 15124277 15127568 Bva06g03050 06 18897372 18902652 ECH
Bva06g03050 06 18897372 18902652 Bva06g03050 06 18897372 18902652 ECH