Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01865 ATGAAGGAAAACCAACAACAACCTTGCATTACCTGCACGACTTTCAATATCCTCGCTCCCATTTACAAACGTTTAAACCACGAGAACCCAAGTTGCCGCGAAAGCGACTGCAGGGCAAATTGGTTAGCCAGGAATCACAAGATATTGGATTGGTTGCTGTATGAGAGATCTTCCATTATCTGTCTTCAGGAGTTTTGGGTTGGAAACCAAGAGCTTGTTGATATGTATCAGAAGAGACTCGGTGACGCTggctatattaattttaatcttgGACGGACTAACAACCGTGGTGATGGCCTTCTTATAGCAGTGCAAAAGGACTACTTtcgaattattaattataaggaGGTGCACTTCAATGATTGCGGTGATCGTGTAGCTCAGTTGTTACATGTCGAAttgaattttccattttcacaGTCTCGAAACAACGACATCAGGCAGGAAATTCTTATTGTCAACACCCACTTACTATTTCCCCATGACTCAAGTTTATGTATTGTTCGACTGCATCAGGTCTACAAGATACTTCAATATGTGGAATCTTATCAGAGAGCTCATGAGCTCAAGCCCATGCCCATCATTCTCTGCGGTGACTGGAATGGAAGTAAACGCGGCCATGTATACAAGTTCCTTAGGTCTCAAGGATTTGTATCATCTTATGATACTGCACATCAGTACTCTGATGCAGATGCTCACAAGTGGGTTAGTCACCGCAATCATCGGGGAAACATTTGCGCTGTTGATTTCATATGGCTTCTGAATCCTGAAAAAAATCCGAAACGGAAACTACTAAAAGCAAGTTGGATTGAAGCAGTATTTGCCATGTTCAAGTATCTATTGCGCAGAGATTCACAGACAGAGACTGAAGCATTTGCCTTTCTGAAGGCTGATAATGAAGATTGCATCACCTATTCTGGTCTCTGTGAAGCACTTCGACAGCTTAATTTAATTGGTCATCGTCATGGACTAAGTGTTCAAGAAACAATGGACCTATGGATCCAAGCAGACACAGATGGAAATGGTTTTATAGATTATAAAGAATTTCAGAAACAAATCTGGAATCCAGCAGGGTCAGATGTGGgagatgaaaacaaaaataagcaGAATAAAGATAATTCAAATGGTAGCCAAGAGCAAAGCATCGGTTTCACAGTGAAAAATgcagttttctttccttctgaAGTGGAGAAAGGCAGATGGCCCGAGAATTACTCCCTTTCTGATCATGCAAAACTCACAGTAGTGTTCTCGCCCATAAGAATGCCGTGTTCATG 1277 0.3908 MKENQQQPCITCTTFNILAPIYKRLNHENPSCRESDCRANWLARNHKILDWLLYERSSIICLQEFWVGNQELVDMYQKRLGDAGYINFNLGRTNNRGDGLLIAVQKDYFRIINYKEVHFNDCGDRVAQLLHVELNFPFSQSRNNDIRQEILIVNTHLLFPHDSSLCIVRLHQVYKILQYVESYQRAHELKPMPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTAHQYSDADAHKWVSHRNHRGNICAVDFIWLLNPEKNPKRKLLKASWIEAVFAMFKYLLRRDSQTETEAFAFLKADNEDCITYSGLCEALRQLNLIGHRHGLSVQETMDLWIQADTDGNGFIDYKEFQKQIWNPAGSDVGDENKNKQNKDNSNGSQEQSIGFTVKNAVFFPSEVEKGRWPENYSLSDHAKLTVVFSPIRMPCS 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01865 425 ProSitePatterns EF-hand calcium-binding domain. 337 349 IPR018247 -
Bva12g01865 425 Gene3D - 289 353 - -
Bva12g01865 425 Gene3D Endonuclease/exonuclease/phosphatase 1 288 IPR036691 -
Bva12g01865 425 PANTHER ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY PROTEIN 1 423 - -
Bva12g01865 425 MobiDBLite consensus disorder prediction 356 379 - -
Bva12g01865 425 ProSiteProfiles EF-hand calcium-binding domain profile. 324 360 IPR002048 GO:0005509
Bva12g01865 425 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 1 423 - -
Bva12g01865 425 Pfam Endonuclease/Exonuclease/phosphatase family 39 220 IPR005135 GO:0003824
Bva12g01865 425 SUPERFAMILY DNase I-like 7 227 IPR036691 -
Bva12g01865 425 SUPERFAMILY EF-hand 209 353 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01865 Bva-Chr12 15079306 15082924 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01865 1 321 EF-hand Containing Proteins AT5G54130 74.845 0.0 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01865 - - gmx:100779780 711.835
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01865 12 15079306 15082924 Bva06g03061 06 18947370 18950562 ECH
Bva12g01865 12 15079306 15082924 Bva12g01865 12 15079306 15082924 ECH