Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g03061 ATGATAAAAGATTATAGGAAGATTCAGACAATGGGGAGGATTTTTAGGATCGGGAGCTATGCATTTGCTTCTTCACCGAAGGAAACCCAACAACTACCTTGCATTTCCTGCACGACTTTCAATATCCTCGCTCCAATTTACAAACGTTTAGACGAAGagGACCCAACTTGCCGCGAAAGCGATTACAGGGCATATTGGTTGGACAGGAATGAGAGAATATTGGAGTGGCTGTTGTATGAGAAATCTACCATTATATGTCTTCAGGAGTTTTGGGTTGGAAACCAAGAGCTTGTTGATATGTACGAGAAGGGACTCGTTGATGCTAACTATGTTAGTTTTAATCTTGGACGGACTAACAACCGTGGTGATGGCCTACTTATAGCAGTGCAAAAGGACTACTTTagaattcttaattataaggAGGTGCACTTCAATGATTGTGGTGATCGTGTAGCTCAGTTGTTACATGTTGAATTGAATCTTCCGTTCGATGTCAGGCAGGAAATTCTTATTGTCAACACCCACTTACTATTTCCCCATGACTCAAGTTTATGCGTAGTACGACTACGTCAGgTCTACAAGATACTTCAATATTTGGAATCTTACCAGAAAGCTCATGAACTCAAGCCAGTGCCAATCATGCTTTGCGGTGACTGGAATGGAAGTAAACGTGGCCATGTATACAGGTTCCTTAGGTCACAGGGATTTATATCATCTTATGATACAGCACATCGGTACACTGATGCAGATGCTCACAAGTGGGTTAGTCATCGCAATCATCGGGGAAATATTTGTGCTGTTGATTTTATATGGCTTCTAAATCCTGATAAATATCGAAAACTACTAAAAGCAAGTTGGATTGAAGCAGTATTTGCCATGTTCAAGTATCTATTGCACAGAACTTCACTGACAGAGAGTGATACATTTGCCTTTCTAAAGGCTGATAATGAAGATTGTATCACCTATTCTGGTTTCTGTGAAGCACTCCAGCAGCTTAATTTAATCGGCCATCGTTATGGACTCAGTGTTCAAGAGACGATGGACTTGTGGGGCCAAGCAGACATAGATGGAAATGGTTTTGTAGATTATAAAGAATTTCAGCAACGAATCTGGAGTCCAGCAGGGTCAGAGATACTAGATGAAAAGGAGAATGAGAAGCAGATTGATAGTTCAAATGGTAATCAAGATCAAAGCATTGGTTTCAATGTAAAAAATGcacttttatttccttctgAGGTGGAGAAAGGCATATGGCCTGAAGACTACACCCTTTCTGATCATGCAAAACTCACTGTGGTGTTCTCGCCCATAAGAATGCCGTGTTCAGCTTA 1331 0.3982 MIKDYRKIQTMGRIFRIGSYAFASSPKETQQLPCISCTTFNILAPIYKRLDEEDPTCRESDYRAYWLDRNERILEWLLYEKSTIICLQEFWVGNQELVDMYEKGLVDANYVSFNLGRTNNRGDGLLIAVQKDYFRILNYKEVHFNDCGDRVAQLLHVELNLPFDVRQEILIVNTHLLFPHDSSLCVVRLRQVYKILQYLESYQKAHELKPVPIMLCGDWNGSKRGHVYRFLRSQGFISSYDTAHRYTDADAHKWVSHRNHRGNICAVDFIWLLNPDKYRKLLKASWIEAVFAMFKYLLHRTSLTESDTFAFLKADNEDCITYSGFCEALQQLNLIGHRYGLSVQETMDLWGQADIDGNGFVDYKEFQQRIWSPAGSEILDEKENEKQIDSSNGNQDQSIGFNVKNALLFPSEVEKGIWPEDYTLSDHAKLTVVFSPIRMPCSA 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g03061 443 ProSitePatterns EF-hand calcium-binding domain. 354 366 IPR018247 -
Bva06g03061 443 PANTHER ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY PROTEIN 6 441 - -
Bva06g03061 443 SUPERFAMILY DNase I-like 34 246 IPR036691 -
Bva06g03061 443 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 6 441 - -
Bva06g03061 443 SUPERFAMILY EF-hand 249 372 IPR011992 -
Bva06g03061 443 Gene3D Endonuclease/exonuclease/phosphatase 19 438 IPR036691 -
Bva06g03061 443 Pfam Endonuclease/Exonuclease/phosphatase family 39 240 IPR005135 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g03061 Bva-Chr6 18947370 18950562 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g03061 12 338 EF-hand Containing Proteins AT5G54130 73.112 0.0 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g03061 - - gmx:100797792 703.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01865 12 15079306 15082924 Bva06g03061 06 18947370 18950562 ECH
Bva06g03061 06 18947370 18950562 Bva06g03061 06 18947370 18950562 ECH