Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01146 ATGGGAGAAGGGAAGCAAGTTCCACTGTTTGAATCAAAAGAAGCAAGATTTCGACTTGTTTACAAGCTGTTtgcttctacaatatttgcaGCCATTTGCTGGATATGGGTTTATAGATTCACAAACATTCCAAGAGCTGGAGAACAAGGACGATGGCCATGGATCGCCATATCCATGTCTGAACTTGGTTTTGGACTCTACTGGATAATCACTTCGTGTGTTCGTTGGAAAATCGTCTTTCATTCTCCTTTCAAACAAAGGCTCTCAAACAGATACGATGAAGACAAGTTACCTCCGATGGACATTTTTGTGTGCACCGCAGATCCTTTGAAGGAGCCTCCAAGTTTGGTCATCAACACAGTGCTATCAGTAATGTCTTACAATTATCCCCCAGAGAAGCTCAGTATTTATCTTTCCGATGATGGAGGTTCTGAGCTAACTTTCTATGCTCTCTTAAGGGCCTCTGATTTCTCCAAGCATTGGTTACCCTTCTGCAGAAGATTCAACATTGAACCCAGGTCGCCGGAGGCATACTTCTCCGGCCACCATTCCGATGACAAAGAATGGCTCTCCATCAAGAAATTATACGAAGAGATGAAAACTCAGATTGAATCAGTTGAGAACATGGATAAGATATCTGAAGACATGAGGAAACAACATAGAGGATTCGCAGAATGGAATTCCAAAACGACAAAGCAGGACCATCAATCCATTGTGCAgATAATAATTGATGGAAGAGACAGAAGTGCTGTGGATGATGATGGATTTCAATTGCCAACGCTTGTATACATGGCTCGGGAAAAGAGACCTAATCACCCTCACAACTTCAAAGCAGGAGCTATGAATGCACTAATACGACTTTCATCAGTGATAAGCAATGCTCCTTTCATTCTCAACTTGGACTGTGACATGTATACAAATGATGCAGATGCAGTGAAAGAAGCCCTATGTTTCTTCATGGATGAAGACAAAGGCCACGAAATTTCTCATGTGCAATTTCCACAGGACTTCTACAACATCACTAAGAATGACCTCTACGGAAATTCATTCCCTGTAATCAACAAGCTTGAGATGACTGGCATATGTGCACATGGAGCAGCTATGTACAATGGAACTGGGTGTTTCCATAGAAGAGAAAGCATTACAGGAATGCACTTCAAAGACTATAAACCAAAACACGACAGCTACTccaaaagagaagacaagagAACCGTGGATGAATTGATCGATGCCTCAAAAGTTCTTGCAGATTGTACCTACGAGCAAGGCACTCTATGGGGCAAGCAGATGGGATTGGTATATGGGGTTTCTGTTGAAGACGTTTGCACTGGCATTGCTATCGCTGGCAGAGGGTGGAAATCGATTCATTACAATCCAGAGAGGCCAGCTTTCTTGGGTATAGCTCCAGCAACCTTAGAAGTTGCTCTTGTTCAACAAACGAGGTGGTCTGAAGGCTTGCTTCAGATTTTCTTCTCAAAGTACTGTCCTTTCACTTATGGGTATAGGAAGATCAAACTGGGTGTTCAAATGGGATACTGTGTCTATCTCTTGTGGGCTCCACTGTCCCTACCCTCTCTCTGTTATGTAATTGTTCCTCCAATCTGCCTACTCAAAGGCATTCCCTTATTCCCTCAGCTTACAAGCCTGTGGTTCCTTCCCTTTGCATATGCCTTTCTTGCCAATGCTGCGTATAGCCTATGTGAGGGTCTGAGTTGTGGCCAAACCTTCAAGGGTTGGTGGAACTTGCAGAGAATGAGGCTCATTCGAAGAACCACTGCATATTTTATTGGTTTCGTCGATGTTATAAGAAAGCAATTAGGCCTATCTCAGACCAAATTCGTTCTCACAGATAAGGAAGCATCAGAAGATGCCCTAAGGAGATATGAGCAAGAGGTGTTTGattttggaagctcttcagTTATGTTCACCATGATTGCAACATTAGCATTGCTAAACCTCTTCGGATTCATCGGGGGAATGAAGAGTGTGATAATGGATATGAACTCGAACAATTCAAGCCAACTGATTCTGCAGATTATGCTTACTGCACTGATTACAATTGTGAATAAACCAATTTATGAGGCTCTCTTCATCCGCAATGATAAGGGTCGGTTTCCATCTTCAGTCATAGTTAAGTCCATGCTTTTGGCTTCGCTGACTTGCTGCCTTGTGCCGCTTCTCTA 2183 0.4187 MGEGKQVPLFESKEARFRLVYKLFASTIFAAICWIWVYRFTNIPRAGEQGRWPWIAISMSELGFGLYWIITSCVRWKIVFHSPFKQRLSNRYDEDKLPPMDIFVCTADPLKEPPSLVINTVLSVMSYNYPPEKLSIYLSDDGGSELTFYALLRASDFSKHWLPFCRRFNIEPRSPEAYFSGHHSDDKEWLSIKKLYEEMKTQIESVENMDKISEDMRKQHRGFAEWNSKTTKQDHQSIVQIIIDGRDRSAVDDDGFQLPTLVYMAREKRPNHPHNFKAGAMNALIRLSSVISNAPFILNLDCDMYTNDADAVKEALCFFMDEDKGHEISHVQFPQDFYNITKNDLYGNSFPVINKLEMTGICAHGAAMYNGTGCFHRRESITGMHFKDYKPKHDSYSKREDKRTVDELIDASKVLADCTYEQGTLWGKQMGLVYGVSVEDVCTGIAIAGRGWKSIHYNPERPAFLGIAPATLEVALVQQTRWSEGLLQIFFSKYCPFTYGYRKIKLGVQMGYCVYLLWAPLSLPSLCYVIVPPICLLKGIPLFPQLTSLWFLPFAYAFLANAAYSLCEGLSCGQTFKGWWNLQRMRLIRRTTAYFIGFVDVIRKQLGLSQTKFVLTDKEASEDALRRYEQEVFDFGSSSVMFTMIATLALLNLFGFIGGMKSVIMDMNSNNSSQLILQIMLTALITIVNKPIYEALFIRNDKGRFPSSVIVKSMLLASLTCCLVPLL 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01146 727 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 5 723 - -
Bva12g01146 727 SUPERFAMILY Nucleotide-diphospho-sugar transferases 113 494 IPR029044 -
Bva12g01146 727 Pfam Cellulose synthase 100 390 IPR005150 GO:0016020|GO:0016760|GO:0030244
Bva12g01146 727 Pfam Cellulose synthase 409 721 IPR005150 GO:0016020|GO:0016760|GO:0030244
Bva12g01146 727 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 88 184 IPR029044 -
Bva12g01146 727 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 227 390 IPR029044 -
Bva12g01146 727 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN CSLE 5 723 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01146 Bva-Chr12 11058795 11066774 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01146 3 727 Glycosyltransferase AT1G55850 47.951 0.0 696
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01146 - - gmx:100779861 1028.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01146 12 11058795 11066774 Bva12g02608 12 19300947 19304311 BWGD