Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01999 ATGAACAGTGACGGGAAAACCATAGCCGATGCTTGGGACTATAAAGGCCGCTCTGCCGAAAAGTCCCAAACCGGTGGTTGGATTTCAGCTGCCATGATTTTAGCTACAGAAGCCACCGAGAGGTTAACAACGCTAGGGATTGCTGTCAATCTGGTCACTTATTTGACGGGGACTATGCATTTAGGCAATGCTTCCTCTGCTAACATAGTCACCAACTTCCTGGGAACTTCCTTCATGCTCTGTTTGCTTGGTGGCTTTGTAGCAGACACTTTTCTTGGCagATACCTTACTATCGCAATCTTTGCAACCGTTCAAGCAACTgGAGTTACGATATTGACGATATCTACCATTTTCTCAAGCCTGCATCCTAGAAAATGCACGGCAGGTAGCGTGACACCTTGCGAGCCAGCGAGCAGCCTGCAGCTAATGGTACTTTACATAGCGCTCTATGTGACTGCCCTTGGCACTGGTGGCCTCAAATCTAGCGTCTCCGGCTTCGGGTCCGATCAGTTTGACGACAcagaagaaacagagaaaaaacaGATGAATGAATTCTTCAActggttcttcttctttataaGCATAGGCTCTCTGGCCGCAGTGACCGTTCTTGTCTACATTCAAGATAACTTGGGAAGAGAATGGGGTTATGGGATTTGTGCCTGTGCTATTGTGTTCGCCCTCCTTGTTTTTCTGTCAGGCACAAGGCACTACCGCTTCAAGAAACTCGTGGGTAGCCCCTTAACTCAAATTGCGGTGGTTTTCGTTGCTGCTTGGAGGAAGAGGCACCTCGAATTGCCTTCTGATTCTTCATTGCTGTTTAACGTCGATGACTTACCCGATCAGGGACAGATCAAGAAGAAGCAGAGGTTACCCCATAGCAAACAGTTTGGGTTCTTGGATAAGGCTGCAATCAAAGAGTCAGAAACACATGCTGTAACCATGGTGGAGAAGAAATGGTGTCTATCAACCCTGACTGATGTTGAAGAAGTGAAGTATGTCTACAAGGACAAGAGGCTTGCCGAGGAGGGCATCCAATTGGAGGAAGACGCTGTTTGCTG 1061 0.4599 MNSDGKTIADAWDYKGRSAEKSQTGGWISAAMILATEATERLTTLGIAVNLVTYLTGTMHLGNASSANIVTNFLGTSFMLCLLGGFVADTFLGRYLTIAIFATVQATGVTILTISTIFSSLHPRKCTAGSVTPCEPASSLQLMVLYIALYVTALGTGGLKSSVSGFGSDQFDDTEETEKKQMNEFFNWFFFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFALLVFLSGTRHYRFKKLVGSPLTQIAVVFVAAWRKRHLELPSDSSLLFNVDDLPDQGQIKKKQRLPHSKQFGFLDKAAIKESETHAVTMVEKKWCLSTLTDVEEVKYVYKDKRLAEEGIQLEEDAVC 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01999 353 Gene3D MFS general substrate transporter like domains 2 336 IPR036259 -
Bva11g01999 353 PANTHER PROTEIN NRT1/ PTR FAMILY 6.3 7 336 - -
Bva11g01999 353 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 7 336 IPR000109 GO:0016020|GO:0022857|GO:0055085
Bva11g01999 353 SUPERFAMILY MFS general substrate transporter 22 263 IPR036259 -
Bva11g01999 353 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 1. 84 108 IPR018456 GO:0006857|GO:0016020|GO:0022857
Bva11g01999 353 Pfam POT family 95 335 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01999 Bva-Chr11 16946370 16949036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01999 10 336 Organic Solute Cotransporters AT1G12110 68.293 1.48e-155 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01999 - - jre:109013118 517.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00300 08 1480580 1484229 Bva11g01999 11 16946370 16949036 BWGD
Bva11g01999 11 16946370 16949036 Bva11g01999 11 16946370 16949036 ECH