Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00300 ATGAGCACACTACCTGAAACACATGGGAAAACCGTAGCCGATGCATGGGACTACAAGGGCCGCCCCGCCGAGAAGGCCAAAACCGGCGGTTGGACTTCAGCTGCCATGATTTTATGTGCAGAAGCCACCGAGAGGTTAACTACGCTTGGAATTGCGTTCAATTTGGTCACTTACTTGACGGGGACTATGCATTTCGGCAATGCTTCCGCTGCTAACACAGTCACCAACTTCTTGGGAACTTCTTTCATGCTTTGTTTGCTTGGTGGCTTTGTGGCGGACACTTTTCTTGGCAGATATCTTACTATCGCCATCTTTGCAACCGTTCAAGCACTGGGAGTGACAATATTGACGATATCTACCATTATCCCAAGCCTACATCCTTCAAAATGCACAGCAGGAAGTGGGAAACCTTGCGAGCCAGCGAGCGGCATGCAGCTATTGGTACTCTATTTAGCGCTCTATGTGACTGCCCTTGGCACCGGTGGCCTCAAATCCAGCGTCTCCGGCTTTGGTTCCGATCAGTTTGACGACTCAGAAGAAACGGAGAAAAAACGGATGTTGAAATTCTTCAActggttcttcttctttataaGCATAGGCTCTCTAGCCGCAGTGACCATTCTCTTCTACATTCAAGATAACATCGGAAGAGAATGGGGTTATGGAATTTGTGCCTTTGCTATTGTGGTGGCTCTCCTTATATTTCTATTGGGCACAAGGCGCTATCGCTTCAGGAAACTCGTTGGTAGCCCCTTAACCCAGATTGCGGTGGTGTTCGTAGCTGCATGGAGGAAGAGGCACCTCGAATCGCCCTCTGATCCTTCATGGCTATTTGACGTCGACGGCATACCCGATCAAAGGCAGAacaagaagaagcagaagcagaggTTGCCTCATAGCAGACAGTTCCGGTTCTTGGACAAGGCTGCAATCAAAGAATCAGAAACAGGTTCTGGAACCATGGAGAAGAAATGGTATCTGTCAACCCTAACAGATGTTGAAGAAGTGAAGATGGAAAAGAGGCTTGCCGAAGTTGGCATCGAATTGGAGGAACAAGATGCTGTTTTCCATGCATA 1076 0.4656 MSTLPETHGKTVADAWDYKGRPAEKAKTGGWTSAAMILCAEATERLTTLGIAFNLVTYLTGTMHFGNASAANTVTNFLGTSFMLCLLGGFVADTFLGRYLTIAIFATVQALGVTILTISTIIPSLHPSKCTAGSGKPCEPASGMQLLVLYLALYVTALGTGGLKSSVSGFGSDQFDDSEETEKKRMLKFFNWFFFFISIGSLAAVTILFYIQDNIGREWGYGICAFAIVVALLIFLLGTRRYRFRKLVGSPLTQIAVVFVAAWRKRHLESPSDPSWLFDVDGIPDQRQNKKKQKQRLPHSRQFRFLDKAAIKESETGSGTMEKKWYLSTLTDVEEVKMEKRLAEVGIELEEQDAVFHA 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00300 358 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 1. 88 112 IPR018456 GO:0006857|GO:0016020|GO:0022857
Bva08g00300 358 Gene3D MFS general substrate transporter like domains 4 345 IPR036259 -
Bva08g00300 358 PANTHER PROTEIN NRT1/ PTR FAMILY 6.3 10 343 - -
Bva08g00300 358 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 10 343 IPR000109 GO:0016020|GO:0022857|GO:0055085
Bva08g00300 358 SUPERFAMILY MFS general substrate transporter 20 266 IPR036259 -
Bva08g00300 358 Pfam POT family 99 338 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00300 Bva-Chr8 1480580 1484229 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00300 3 345 Organic Solute Cotransporters AT1G12110 67.246 1.08e-160 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00300 - - vvi:100259122 499.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00300 08 1480580 1484229 Bva11g01999 11 16946370 16949036 BWGD
Bva08g00300 08 1480580 1484229 Bva08g00300 08 1480580 1484229 ECH