Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01992 ATGCATCGTGGCATTGAAGAGAGGGAGGACAGTGAGAGAGACAGTTCTCACTCCAGCAAACCACGGGCTTCTTGGAGTTCTGATCAAAAGCGttgcttctcttctctttttgggtCGTCTTCACGAGGAGGAATGGCGAAGAGTTACTTCAAACAAGAGCATGAtcttgagaagagaagagctGAGGCTGCAAGGATTAGGGAGAAATACCCAGACAGGATCCCGGTGATTGTGGAGAAGGCAGAAAGAAGTGATATCCCAAGCATTGACAAGAAGAAGTACCTCGTCCCTGCAGACCTGACTGTTGGACAGTTTGTGTACGTTATCCGCAAGAGGATTAAGTTAAGTGCAGAAAAGgcaatctttatttttgtggaTAACGTCCTTCCACCTACAGGTGCCATCATGTCTGCTATATATGACGAGAAGAAGGATGAAGATGGGTTCCTTTATGTAACCTACAGTGGCGAGAACACCTTTGGAAATATCACTTCCCACTTCCATTA 506 0.4111 MHRGIEEREDSERDSSHSSKPRASWSSDQKRCFSSLFGSSSRGGMAKSYFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYDEKKDEDGFLYVTYSGENTFGNITSHFH 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01992 168 MobiDBLite consensus disorder prediction 1 19 - -
Bva11g01992 168 MobiDBLite consensus disorder prediction 1 30 - -
Bva11g01992 168 Gene3D - 39 161 - -
Bva11g01992 168 PANTHER AUTOPHAGY-RELATED PROTEIN 37 161 - -
Bva11g01992 168 CDD Ubl_ATG8 56 158 - -
Bva11g01992 168 PANTHER MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED 37 161 IPR004241 -
Bva11g01992 168 Pfam Autophagy protein Atg8 ubiquitin like 58 161 IPR004241 -
Bva11g01992 168 SUPERFAMILY Ubiquitin-like 47 161 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01992 Bva-Chr11 16918222 16921693 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01992 K08341 - gmx:100499835 231.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00310 08 1515365 1517564 Bva11g01992 11 16918222 16921693 BWGD
Bva11g01992 11 16918222 16921693 Bva11g01992 11 16918222 16921693 ECH