Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00310 ATGGCAAAGAGTTACTTCAAACAAGCGCATGATCTTgagaagagaagagctGAGGCTGCAAGGATTAGGGACAAATACCCAGACAGGATCCCGGTGATTGTGGAGAAGGCAGAAAGAAGTGATATCCCAAGCATTGACAAGAAGAAGTACCTCGTCCCTGCCGACCTGTCTGTTGGACAGTTTGTGTATGTTATCCGCAAAAGGATAAAGTTAAGTGCTGAAAAGgcaatctttatttttgtggaTAACGTCCTTCCACCAACAGGTGCTATCATGTCTGCTCTATATGACGAGAAGAAGGATGAAGATGGGTTCCTTTATGTTACCTACAGTGGCGAGAACACCTTTGGGAATATCACTTGCCACTG 368 0.4103 MAKSYFKQAHDLEKRRAEAARIRDKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLSVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSALYDEKKDEDGFLYVTYSGENTFGNITCH 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00310 122 PANTHER AUTOPHAGY-RELATED PROTEIN 1 117 - -
Bva08g00310 122 Pfam Autophagy protein Atg8 ubiquitin like 14 117 IPR004241 -
Bva08g00310 122 Gene3D - 1 117 - -
Bva08g00310 122 CDD Ubl_ATG8 12 114 - -
Bva08g00310 122 SUPERFAMILY Ubiquitin-like 3 117 IPR029071 -
Bva08g00310 122 PANTHER MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED 1 117 IPR004241 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00310 Bva-Chr8 1515365 1517564 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00310 K08341 - gmx:100499835 232.261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00310 08 1515365 1517564 Bva11g01992 11 16918222 16921693 BWGD
Bva08g00310 08 1515365 1517564 Bva08g00310 08 1515365 1517564 ECH