Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01919 ATGTACAGAGAACGAGGAGGTGTTGGCTCCAAGTCGGAGGTCGGTCCCGTTGATCGGAAGCGAATCAACGACGTCCTCGACAAGCAGCTCGAGCGATCCTCGCCGTCCACTTCTAGGGCAATCAAGGGCAAGGATAGGACGGCCCAATCGTTATTGGCCGTCAAGCAACCGAATGATCATAGGGACTCTCACTCTGCCTCCATTTCTAAGAATTCTAACGCTTCAGATGCAGAATCTGAAACTGACAGTGAAGAGTCAGATGTTAGTGGTTCTGATGGAGATGACACATCTTGGATCTCATGGTTTTGCAATCTGAGAGGAAACGAATTCTTTTGCGAGGTTGATGATGATTATATACAAGATGATTTCAATCTCTGTGGGTTAAGCAGTCAAGTGCCGTACTATGATTATGcacttgatttaattttggaCGTAGAATCCTCCCATGGTGACTCGTTCACAGAAGAACAAAATGAGTTAGTTGAATCAGCAGCAGAGATGCTGTATGGTCTGATTCATGCCCGATACATATTGACAGGCAAGGGAATGGCTGCTATGCTGGACAAGTACAAGAACTATGACTTTGGCAGATGCCCAAGAGTCTATTGCTCTGGACAACCTTGTCTTCCAGTTGGTCAGTCAGACGTTCCCAGGTCAAGTACggtaaaaatatattgccCTAGGTGTGAAGACATCTACTACCCTCGGTCCAAGTATCAAGGCAACATTGATGGAGCTTATTTTGGAACTACATTTCCCCACCTCTTCCTGATGACTTACGGGAATCTGAAGCCACAAAAGCCATCGCAAAGCTATGTTCCGAGAGTTTTTGGCTTCAAACTTCACAAGCCATG 854 0.4461 MYRERGGVGSKSEVGPVDRKRINDVLDKQLERSSPSTSRAIKGKDRTAQSLLAVKQPNDHRDSHSASISKNSNASDESETDSEESDVSGSDGDDTSWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGDSFTEEQNELVESAAEMLYGLIHARYILTGKGMAAMLDKYKNYDFGRCPRVYCSGQPCLPVGQSDVPRSSTVKIYCPRCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMTYGNLKPQKPSQSYVPRVFGFKLHKP 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01919 283 PANTHER CASEIN KINASE II SUBUNIT BETA-2 1 282 - -
Bva11g01919 283 Gene3D - 194 268 - -
Bva11g01919 283 Gene3D protein kinase ck2 holoenzyme, chain C, domain 1 89 193 IPR016149 GO:0005956|GO:0019887
Bva11g01919 283 Pfam Casein kinase II regulatory subunit 96 279 IPR000704 GO:0005956|GO:0019887
Bva11g01919 283 SUPERFAMILY Casein kinase II beta subunit 94 282 IPR035991 GO:0005956|GO:0019887
Bva11g01919 283 ProSitePatterns Casein kinase II regulatory subunit signature. 197 228 IPR000704 GO:0005956|GO:0019887
Bva11g01919 283 PRINTS Casein kinase II regulatory subunit family signature 193 214 IPR000704 GO:0005956|GO:0019887
Bva11g01919 283 PRINTS Casein kinase II regulatory subunit family signature 243 260 IPR000704 GO:0005956|GO:0019887
Bva11g01919 283 PRINTS Casein kinase II regulatory subunit family signature 168 189 IPR000704 GO:0005956|GO:0019887
Bva11g01919 283 PRINTS Casein kinase II regulatory subunit family signature 96 112 IPR000704 GO:0005956|GO:0019887
Bva11g01919 283 PRINTS Casein kinase II regulatory subunit family signature 113 127 IPR000704 GO:0005956|GO:0019887
Bva11g01919 283 PRINTS Casein kinase II regulatory subunit family signature 215 236 IPR000704 GO:0005956|GO:0019887
Bva11g01919 283 SMART CK_II_beta_2 96 279 IPR000704 GO:0005956|GO:0019887
Bva11g01919 283 MobiDBLite consensus disorder prediction 29 44 - -
Bva11g01919 283 MobiDBLite consensus disorder prediction 1 92 - -
Bva11g01919 283 MobiDBLite consensus disorder prediction 14 28 - -
Bva11g01919 283 PANTHER CASEIN KINASE II SUBUNIT BETA 1 282 IPR000704 GO:0005956|GO:0019887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01919 Bva-Chr11 16541595 16545513 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01919 K03115 - gmx:100799304 501.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01919 11 16541595 16545513 Bva08g00394 08 1967389 1970963 BWGD
Bva11g01919 11 16541595 16545513 Bva11g01919 11 16541595 16545513 ECH