Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00394 ATGTACAGAGAGCGAGTTGGTGTTGGTTCTAAATCGGAGGTGGGTTCCGTTGATCGGAAGCGAATCAACGAAGCTTTGGACAAGCAACTCGAGCGATCATCGCCATCTACGTCTAGGGCTATCAACGGCAAGGATAGGTCAGCCCAATCGCTATTTTCGGCCAAGCCACCGCCTGATCATAGGGATCCTCGCTCTGCTCCCATCTCCAAGAATGTAAACGCCTTAGATGGGGAATCTGAAACTGATAGTGAAGAGTCAGATGTTAGTGGTTCTGATGGAGATGACACGTCTTGGATATCATGGTTCTGCAATCTGAGAGGAAATGAATTCTTTTGCGAGGTTGATGATGATTACATTCAAGATGACTTTAACCTCTGTGGATTAAGCAGTCAAGTGCCTTACTATGATTATGCgcttgatttgattttggatGTGGAATCCTCCCATGGTGACTCGTTCACGGAGGAACAAAATGAGTTAATTGAATCAGCAGCAGAGATGCTTTATGGCCTGATTCATGCCCGATACATATTGACAAGCAAAGGAATGGCTGCAATGCTGGACAAGTACAAGAATTATGACTTTGGCAGATGCCCTAGAGTTTACTGCTCTGGACAACCCTGCCTTCCAGTTGGTCAGTCAGACATTCCGAGGTCAAGTACTGTGAAAATATACTGCCCTAGGTGTGAAGACATTTACTATCCTCGGTCCAAGTATCAAGGCAACATTGATGGAGCTTATTTTGGAACTACGTTTCCTCACCTTTTCCTGATGACTTACGGACACCTGAAGCCACAAAAGCCATCGCAGAGCTATGTTCCAAGACtttttggtttcaaacttcacAAACCATG 854 0.4368 MYRERVGVGSKSEVGSVDRKRINEALDKQLERSSPSTSRAINGKDRSAQSLFSAKPPPDHRDPRSAPISKNVNALDGESETDSEESDVSGSDGDDTSWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGDSFTEEQNELIESAAEMLYGLIHARYILTSKGMAAMLDKYKNYDFGRCPRVYCSGQPCLPVGQSDIPRSSTVKIYCPRCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMTYGHLKPQKPSQSYVPRLFGFKLHKP 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00394 284 PANTHER CASEIN KINASE II SUBUNIT BETA 1 283 IPR000704 GO:0005956|GO:0019887
Bva08g00394 284 PRINTS Casein kinase II regulatory subunit family signature 114 128 IPR000704 GO:0005956|GO:0019887
Bva08g00394 284 PRINTS Casein kinase II regulatory subunit family signature 194 215 IPR000704 GO:0005956|GO:0019887
Bva08g00394 284 PRINTS Casein kinase II regulatory subunit family signature 169 190 IPR000704 GO:0005956|GO:0019887
Bva08g00394 284 PRINTS Casein kinase II regulatory subunit family signature 97 113 IPR000704 GO:0005956|GO:0019887
Bva08g00394 284 PRINTS Casein kinase II regulatory subunit family signature 216 237 IPR000704 GO:0005956|GO:0019887
Bva08g00394 284 PRINTS Casein kinase II regulatory subunit family signature 244 261 IPR000704 GO:0005956|GO:0019887
Bva08g00394 284 MobiDBLite consensus disorder prediction 1 20 - -
Bva08g00394 284 Pfam Casein kinase II regulatory subunit 97 280 IPR000704 GO:0005956|GO:0019887
Bva08g00394 284 ProSitePatterns Casein kinase II regulatory subunit signature. 198 229 IPR000704 GO:0005956|GO:0019887
Bva08g00394 284 PANTHER CASEIN KINASE II SUBUNIT BETA-2 1 283 - -
Bva08g00394 284 MobiDBLite consensus disorder prediction 29 49 - -
Bva08g00394 284 MobiDBLite consensus disorder prediction 25 93 - -
Bva08g00394 284 Gene3D - 195 269 - -
Bva08g00394 284 SUPERFAMILY Casein kinase II beta subunit 95 283 IPR035991 GO:0005956|GO:0019887
Bva08g00394 284 SMART CK_II_beta_2 97 280 IPR000704 GO:0005956|GO:0019887
Bva08g00394 284 Gene3D protein kinase ck2 holoenzyme, chain C, domain 1 90 194 IPR016149 GO:0005956|GO:0019887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00394 Bva-Chr8 1967389 1970963 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00394 K03115 - gmx:100799304 495.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00394 08 1967389 1970963 Bva11g01917 11 16531989 16535370 BWGD
Bva11g01919 11 16541595 16545513 Bva08g00394 08 1967389 1970963 BWGD
Bva08g00394 08 1967389 1970963 Bva08g00394 08 1967389 1970963 ECH