Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01883 ATGGCCTGCTTAGATGTCTGTAAAGAGAGCAATTTCAAAGAAGAACCAGAAGAGTTAACTCTTGATGGAAGTGTTGATTGGCATGGCCGTCCTGCAATCAGAGACAAATCCGGAAGATGGGTTGCTGGAATTATCATACTCCTGAACCAAGGTCTGGCCACCCTAGCATTCTTTGGTGTGGGAGTGAACCTAGTGCTGTTCCTGACGAGGGTGTTGGGTCAAAATAACGCTGATGCTGCTAACAATGTGAGCAAGTGGACTGGGACTGTTTACATCTTTTCTCTTGTGGGTGCTTTCCTTAGTGATTCTTATTGGGGAAGATACAAAACTTGTGCCGTCTTTCAGATCATCTTTGTAATTGGTCTGGTATCCTTGTCGCTGTCTTCGTACCTCTTCTTGATAAGGCCTAAGGACTGTGGCAGTGAAACAATTCCATGTGGGAAACATTCAAGGTTGGAGATTGGCATGTTTTACCTTTCTACCTACCTTGTTGCGCTTGGAAATGGAGGATATCAGCCTAACATTGCCACATTAGGGGCTGATCAGTTTGATGAAGAGCACTCTAAAGAGGGTCCCTCAAAGGTGGCCTTCTTCAGCTACTTTTACCTAGCTTTGAACCTAGGTTCCCTATTCTCAAACACCATCCTGGGTTACTTTGAGGATGAAGGAATGTGGGCTTTTGGGTTCTGGGTGTCTGCAGGCTCTGCCTTTGCAGCATTGCTCTTATTTCTTGTTGGGACTCCAAGGTATAGACACTTCAAGCCCAGTGGCAATCCTCTTTCAAGGTTCTGCCAAGTCCTTGTTGCTGCTTCAACCAAATGGAGAATCCAAATGCCACCAAACGGAGAGGATTTATATCACATGGACACAAAAGAGTCCTCTACCAATGGCAACAGAAGGATTCTCCACACTAATGGCTTCAAGTTTTTGGATAGGGCGGCATTCATATCGTCAAAAGATTCTCAGGACCAGAAGCATGGTGTTTACAACCCATGGCGTCTCTGCCCATTGGAATTCTTCAATGCTCAGACACCAGATGGATTGAAGAGCTTCGGAAGTGCACTTTGCATGACCTCCATATCACTTGGAAACTACGTGAGTAGCTTACTTGTTAGTATAGTTATGAAGATCTCCACTGAGGATCACATGCCAGGATGGATCCCAGGAAATCTCAACAAGGGTCACCTGGATAGGTTTTACTTTCTCTTAGCTGCTTTGACATCAATGGACTTGGTCGTTTATATTGCAAGTGCAAAGTGGTATAAGTGTATACAGCTAGAAGGGAAATGTGAAGACAATGATGATGAACCTGATAACTTCAAAGTATA 1328 0.4443 MACLDVCKESNFKEEPEELTLDGSVDWHGRPAIRDKSGRWVAGIIILLNQGLATLAFFGVGVNLVLFLTRVLGQNNADAANNVSKWTGTVYIFSLVGAFLSDSYWGRYKTCAVFQIIFVIGLVSLSLSSYLFLIRPKDCGSETIPCGKHSRLEIGMFYLSTYLVALGNGGYQPNIATLGADQFDEEHSKEGPSKVAFFSYFYLALNLGSLFSNTILGYFEDEGMWAFGFWVSAGSAFAALLLFLVGTPRYRHFKPSGNPLSRFCQVLVAASTKWRIQMPPNGEDLYHMDTKESSTNGNRRILHTNGFKFLDRAAFISSKDSQDQKHGVYNPWRLCPLEFFNAQTPDGLKSFGSALCMTSISLGNYVSSLLVSIVMKISTEDHMPGWIPGNLNKGHLDRFYFLLAALTSMDLVVYIASAKWYKCIQLEGKCEDNDDEPDNFKV 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01883 442 PANTHER PEPTIDE TRANSPORTER 15 336 - -
Bva11g01883 442 PANTHER PEPTIDE TRANSPORTER 337 430 - -
Bva11g01883 442 SUPERFAMILY MFS general substrate transporter 30 253 IPR036259 -
Bva11g01883 442 Gene3D MFS general substrate transporter like domains 337 428 IPR036259 -
Bva11g01883 442 Pfam POT family 108 321 IPR000109 GO:0016020|GO:0022857|GO:0055085
Bva11g01883 442 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 337 430 IPR000109 GO:0016020|GO:0022857|GO:0055085
Bva11g01883 442 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 15 336 IPR000109 GO:0016020|GO:0022857|GO:0055085
Bva11g01883 442 Gene3D MFS general substrate transporter like domains 11 336 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01883 Bva-Chr11 16337925 16342413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01883 337 440 Organic Solute Cotransporters AT1G32450 81.731 3.86e-50 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01883 K14638 - gmx:100778608 577.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00430 08 2206204 2210386 Bva11g01883 11 16337925 16342413 BWGD