Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00430 ATGGCCTGCTTAGAAGTCTGTAAAGAGAGCAATTTCAAGGAAGAGCCAGAAGGGTTAACTCTTGATGGAAGTGTTGATTGGCATGGCCGTCCTGCAATCAGAGACGAATCCGGAAGATGGGTTGCTGGAATTATCGTACTCTTGAACCAAGGTCTGGCCACCTTAGCATTCTTCGGCGTGGGAGTGAACCTAGTGCTGTTCCTGACAAGGATTTTGGGTCAAAATAACGCTGAAGCTGCTAACAATGTCAGCAAGTGGACTGGCACTGTTTACATCTTCTCTCTTGTGGGTGCCTTCCTTAGTGATTCTTACTGGGGAAGATATAAAACATGTGCTGTCTTTCAGATCATCTTTGTAATTGGTCTGGTATCCTTGTCGCTGTCGTCATACCTCTTCTTGGTCAGGCCTAAGGGCTGTGGGAGTGAAAAAATGCCATGTGGGAAACATTCAAGCTTGGAGATGGGCATGTTTTACCTTTCCATCTATCTTGTTGCGCTAGGGAATGGAGGATATCAGCCAAACATTGCGACATTTGGGGCTGATCAGTTTGATGAAGAGCACTCTAAAGAGGGCCCCTCAAAGGTGGCCTTCTTCAGCTACTTTTACCTAGCTCTGAACCTTGGTGAACTATTCTCAAACACCTTCCTGGTTTACTTTGAGGATGAAGGAATGTGGGCTCTTGGGTTTTGGGTGTCTGCAGCCTCTGCCTTTGCAGCATTGCTCTTGTTTCTTGTTGGGACTCCAAGGTACAGGCACTTCAAGCCCAGTGGCAATCCTCTCTCAAGGTGCAGCCAAGTCCTTGTTGCTGCTTCGACCAAATGGGGAGTACAAATGCCACCAAATGGAGAGGACTTATATGATATAGACACAAAGGAGTCTTCTACCACTGGCAACAGAAGGATTCTCCACACCCATGGCTTCAAATTTTTGGATAAGGCGGCATTCATATCATCAAGAGATTTTGAGGACCAGAAGTACGGTATTCGCAACCCATGGCGTCTCTGCCCAGTAACCCAAGTTGAAGAAGTGAACTTGCTTGTTAGCATGGTTATCAAGATCTCCACTGAGGATCACATGCCAGGGTGGATCCCCGGAAACCTCAACAAAGGTCACCTAGATAGGTTTTACTTTCTCTTAGCTGTCTTGACATCAGTGGACTTAGTCGTCTATATTGCATGTGCAAAGTGGTACAAGTGTATACAACTAGAAGGGAGATGTGAAGGGTCTGAAGACGATGATGACGAATCTGGTAAGGTCGGAGTCTA 1265 0.464 MACLEVCKESNFKEEPEGLTLDGSVDWHGRPAIRDESGRWVAGIIVLLNQGLATLAFFGVGVNLVLFLTRILGQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRYKTCAVFQIIFVIGLVSLSLSSYLFLVRPKGCGSEKMPCGKHSSLEMGMFYLSIYLVALGNGGYQPNIATFGADQFDEEHSKEGPSKVAFFSYFYLALNLGELFSNTFLVYFEDEGMWALGFWVSAASAFAALLLFLVGTPRYRHFKPSGNPLSRCSQVLVAASTKWGVQMPPNGEDLYDIDTKESSTTGNRRILHTHGFKFLDKAAFISSRDFEDQKYGIRNPWRLCPVTQVEEVNLLVSMVIKISTEDHMPGWIPGNLNKGHLDRFYFLLAVLTSVDLVVYIACAKWYKCIQLEGRCEGSEDDDDESGKVGV 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00430 421 Gene3D MFS general substrate transporter like domains 12 355 IPR036259 -
Bva08g00430 421 Pfam POT family 108 350 IPR000109 GO:0016020|GO:0022857|GO:0055085
Bva08g00430 421 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 15 344 IPR000109 GO:0016020|GO:0022857|GO:0055085
Bva08g00430 421 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 344 406 IPR000109 GO:0016020|GO:0022857|GO:0055085
Bva08g00430 421 PANTHER PEPTIDE TRANSPORTER 15 344 - -
Bva08g00430 421 PANTHER PEPTIDE TRANSPORTER 344 406 - -
Bva08g00430 421 SUPERFAMILY MFS general substrate transporter 31 253 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00430 Bva-Chr8 2206204 2210386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00430 344 415 Organic Solute Cotransporters AT1G32450 79.167 1.26e-31 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00430 K14638 - gmx:100778608 580.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00430 08 2206204 2210386 Bva11g01883 11 16337925 16342413 BWGD