Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01558 ATGGGgtctctctgtttctctctgTTTATGATTATTGCCGCTTCTGGTTCTGGACTGTTATTTGGAGTAGAATCAAAGACATATTGGGGAGACATTGAGGTTTTGAAGGAGTTCAAGAATGGAATCGACCCTGCTTCCCTGACTGCTGGTTCATGCGTCGCTTCGTGGGACTTCACCCTTGATCCGTGCGACAATCTCTTCGGCGAGAAATTCACATGCGGGTTCAGGTGTGACCTCGTCATTTCCGGGACGAGTCGAGTCACGGAACTCAGCCTCGACCAGGCGGGTTATGCTGGATCCTTGGCCTCCACTTGGAACCTTCCTTTCTTGGTAACTCTGGATTTCTCAAATAACTACTTCTCTGGGCAGGTTCCCGAGTCTTTATCCAACTTGACTCGATTGCGTCGACTCGGTTTATCGAGGAACTCGTTCGCCGGTGAGATTCCCGCTTCAATTGGGTCCCTTTCTAATCTTGAAGAACTGTACCTGGATAACAACAATTTGCAAGGAACAATCCCAGGGAGCTTCAGTGGCCTCGTGAGCTTGAAGAGGCTTGAAATTCAGTTGAACAAGCTTTCGGGCCAACTTCCCGATTTGGGCTCTCTCAAAAGCCTTTATTACTTGGACGCCAGCGACAATGCCATAAGTGGACAAGTTCCTGCGTCATTGCCCAGTTCTCTAGTTGAACTTTCGATCAGAAACAACAGCTTAGGTGGAAGCTTGACATCTAAAAGCTTCATAAATTTGGAGTATCTTCAAGTAGTTGATTTAAGTTACAACCGAATCGGAGGCTCTGTTCCGTTGGTTTTATTTGAACTCGCATCGCTGCAGCAATTGATCCTCTCCTTCAACCAGTTGTCGTCCATAGAAACGCCTTCTTATCACGGTGTGGGTTCCCGGAGTGGGCTCATTGCGATTGATATAAGCAACAACAATCTTCGAGGCTTTTTACCTTCATTCATGGCACTAATGCCAAAGCTTTCATCTTTGTCATTGGAGAACAACAAATTCAGGGGTATGATTCCGACCCAGTATGCTTTGAAGACTGTTTATCCAGAATCTGGGATGTCACCATTCGAAAGGTTACTGTTGGCTGGAAATTACTTGTTTGGACTGATACCCAGTCCTCTGATGGCACTCAAGCCGGATTCTGCTAATGTTAGGCTAGTTGACAACTGCCTGTACAGATGCccacttattttctttttctgtcaaGGTGGTCAACAAAAATCATTACAAGAATGTAGGAGATTCAACCCCCTCATCCCAta 1271 0.4477 MGSLCFSLFMIIAASGSGLLFGVESKTYWGDIEVLKEFKNGIDPASLTAGSCVASWDFTLDPCDNLFGEKFTCGFRCDLVISGTSRVTELSLDQAGYAGSLASTWNLPFLVTLDFSNNYFSGQVPESLSNLTRLRRLGLSRNSFAGEIPASIGSLSNLEELYLDNNNLQGTIPGSFSGLVSLKRLEIQLNKLSGQLPDLGSLKSLYYLDASDNAISGQVPASLPSSLVELSIRNNSLGGSLTSKSFINLEYLQVVDLSYNRIGGSVPLVLFELASLQQLILSFNQLSSIETPSYHGVGSRSGLIAIDISNNNLRGFLPSFMALMPKLSSLSLENNKFRGMIPTQYALKTVYPESGMSPFERLLLAGNYLFGLIPSPLMALKPDSANVRLVDNCLYRCPLIFFFCQGGQQKSLQECRRFNPLIP 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01558 423 ProSiteProfiles Leucine-rich repeat profile. 275 296 IPR001611 GO:0005515
Bva11g01558 423 Gene3D Ribonuclease Inhibitor 198 414 IPR032675 -
Bva11g01558 423 SUPERFAMILY L domain-like 52 394 - -
Bva11g01558 423 Pfam Leucine rich repeat 226 286 IPR001611 GO:0005515
Bva11g01558 423 Pfam Leucine rich repeat 156 215 IPR001611 GO:0005515
Bva11g01558 423 SMART LRR_typ_2 155 178 IPR003591 -
Bva11g01558 423 SMART LRR_typ_2 273 296 IPR003591 -
Bva11g01558 423 SMART LRR_typ_2 202 230 IPR003591 -
Bva11g01558 423 SMART LRR_typ_2 324 347 IPR003591 -
Bva11g01558 423 SMART LRR_typ_2 107 131 IPR003591 -
Bva11g01558 423 Gene3D Ribonuclease Inhibitor 31 197 IPR032675 -
Bva11g01558 423 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 7 421 - -
Bva11g01558 423 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 7 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01558 Bva-Chr11 14635552 14637087 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01558 81 381 Receptor kinase-like Gene Family AT1G17750 28.615 1.39e-22 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01558 - - adu:107478747 576.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00813 08 4174648 4176362 Bva11g01558 11 14635552 14637087 BWGD