Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00813 ATGgagcttctctttttctctctgtttttgATTATTGCCGCTTCTGGTTCTGGACTGTTTTTTGGTGCAGAATCCAAGACATACTGGGGAGACATTGAGGTTTTGAAGGAGTTCAAGAATGCAGTGGACCCTGCTTCTGTGACTGCTGGTTCGTGCGTCAGTTCCTGGGACTTCACCCTTGATCCATGCGACAACCTCTTCGGCGAGAAATTCACTTGCGGGTTCAGGTGTGACCTCGTCATTTCTGGGACGAGTCGAGTCACGGAACTCAGTCTGGATCAGGCCGGTTATGCTGGATCCCTGTCCTCCTCCACTTGGAACCTTCCTTTCTTGGAAACTCTGGATTTCTCCAATAATTACTTTTCTGGGCCAATCCCTGAGTCGTTATCCAACTTGACTCGGTTGCGTCGACTCGTTTTGTCAAGGAACTCGTTCGCCGGTGAGATACCCGGTTCAATTGGTTCCCTTTCTAATCTTGAAGAACTATACTTAGATAACAACAATTTGCAAGGAACAATCCCAGCGAGTTTCGGTAGCCTCTTGGGCTTGAAGAGGCTTGAAATTCAGCTCAACAAGCTCTATGGCCAGCTTCCCGATTTGGGCTCTCTCAAAAACCTCTATTACTTGGACGCTAGCGACAATGCCTTCAGCGGACAAGTTCCTGCTTCATTGCCCAATTCTCttgttgaaatttcaattcGAAACAACAGCTTAAGTGGGAGCTTAACATCTCAGAGGCAGAGCTTCAGAAATTTGCAGTATTTGCAAGTAGTTGATTTAAGTTACAACCGAATCGGAGGTTCTGTTCCGTTGGTTTTATTTGAACTTCCATCGCTGCAGCAACTGACCCTCTCTTTCAACCAATTCTCGTCCATAGAAACACCTTATTATAGTGTTGGTTCACAGAGCGGGCTCATTGCGGTTGATATAAGCAACAACGTTATTCAAGGCTTTTTACCTATGTTCATGGCACTAATGCCAAAGCTATCATCTTTATCCTTGGAGAACAACAGATTCACGGGTATGATTCCGACCCAGTACGCTTTGAAGACCGTTTTTCCAGAATCTGGAATGTCACCGTTCGAAAGGCTATTATTGGGTGGAAATTACTTGTTTGGACTCATCCCCGGTCCTCTGTTGTCCCTCAAACCGGGTTCTGCAAATGTTAGGCTAGTTGACAACTGCTTCTACAGATGCccacttattttctttttctgccaAGGTGGTCAACAAAAGTCATTACAAGAGTGTAAGAGATTCAACCCTTTCATCCCATA 1277 0.4346 MELLFFSLFLIIAASGSGLFFGAESKTYWGDIEVLKEFKNAVDPASVTAGSCVSSWDFTLDPCDNLFGEKFTCGFRCDLVISGTSRVTELSLDQAGYAGSLSSSTWNLPFLETLDFSNNYFSGPIPESLSNLTRLRRLVLSRNSFAGEIPGSIGSLSNLEELYLDNNNLQGTIPASFGSLLGLKRLEIQLNKLYGQLPDLGSLKNLYYLDASDNAFSGQVPASLPNSLVEISIRNNSLSGSLTSQRQSFRNLQYLQVVDLSYNRIGGSVPLVLFELPSLQQLTLSFNQFSSIETPYYSVGSQSGLIAVDISNNVIQGFLPMFMALMPKLSSLSLENNRFTGMIPTQYALKTVFPESGMSPFERLLLGGNYLFGLIPGPLLSLKPGSANVRLVDNCFYRCPLIFFFCQGGQQKSLQECKRFNPFIP 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00813 425 Pfam Leucine rich repeat 228 289 IPR001611 GO:0005515
Bva08g00813 425 Pfam Leucine rich repeat 157 215 IPR001611 GO:0005515
Bva08g00813 425 SUPERFAMILY L domain-like 75 418 - -
Bva08g00813 425 Pfam Leucine Rich Repeat 111 132 IPR001611 GO:0005515
Bva08g00813 425 SMART LRR_typ_2 156 180 IPR003591 -
Bva08g00813 425 SMART LRR_typ_2 326 349 IPR003591 -
Bva08g00813 425 SMART LRR_typ_2 108 132 IPR003591 -
Bva08g00813 425 SMART LRR_typ_2 276 300 IPR003591 -
Bva08g00813 425 Gene3D Ribonuclease Inhibitor 31 199 IPR032675 -
Bva08g00813 425 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 8 423 - -
Bva08g00813 425 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 8 423 - -
Bva08g00813 425 Gene3D Ribonuclease Inhibitor 296 395 IPR032675 -
Bva08g00813 425 Gene3D Ribonuclease Inhibitor 200 295 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00813 Bva-Chr8 4174648 4176362 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00813 58 396 Receptor kinase-like Gene Family AT1G17750 26.615 3.12e-23 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00813 - - adu:107478747 588.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00813 08 4174648 4176362 Bva11g01558 11 14635552 14637087 BWGD
Bva08g00813 08 4174648 4176362 Bva08g00813 08 4174648 4176362 ECH