Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01511 ATGATTAAAACCTGTTGCCAGGCCCTGGCATCAACCTCACCAGCAAGTAAAGCTGAGTTCTCCTCTTTATTTCAGGAACATTGGAAAAGGCACTCTGTAAATCTCGCTCTCGATCTTTGGCTTTGCTTTGATTCTAAATCTGCCACCATGGTGCTGGAGGCGACAATGATCTGTATTGACAATTCGGAATGGATGCGCAATGGAGATTACGCTCCTTCAAGGTTTCAAGCTCAAGCAGACGCTGTCAATCTTATTTGTGGCGCTAAAACCCAGTCTAATCCGGAAAATACGGTTGGAGTTCTAACAATGGCAGGGAAGGGGGTACGCGTATTGGTCACTCCTACCAGTGACCTGGGCAAGATCTTAGCTTGCATGCATGgactagAAATAGGTGGTGAGATGAACCTAGCTGCTGGAATTCAGGTGGCACAATTGGCTTTAAAgcatagacaaaataaaaagcagcAGCAAAGGATCATTGTCTTCACTGGAAGTCCTATCAAGCATGAGAAGAAGTTGCTGGAGATGATTGGGAGGAAGTTGAAAAAGAACAGTGTAGCACTTGACATTGTCAATTTTGGTGAAGAAGATGAGGGGAAGACAGAGAAGCTGGAAGCACTCCTTGCAACTGTTAACAATAATGATACCAGTCACATTGTTCATGTTCCACCGGGTCCAAATGCTCTTTCAGATGTACTTATAAGTACACCTATTTTTACTGGTGATGGGGAAGGTGGAAGTGGTTTTGCAGCAGCTGCAGCCGCTGCTGCAGCTGGTGGTGTATCTGGTTTTGAGTTTGGGGTGGATCCAAACTTGGACCCCGAACTCGCTCTTGCTCTAAGAGTTTCAATGGAAGAGGAGAGGGCCAGACAAGAAGCAGCAGCTAAAAAGGCTGCAGAGGAGGCTGCTAAACAGGAGAAAGGTGGTGAGCAACCAGCCAGCTCACAAGATGCAACAATGACTGAGCGTGCTAGTGCAGCAACTTCTGAAGCTGATCACAAGACAAACGATCTAATGGATGATGAGAACGCTCTACTAAAGCAGGCACTTGCAATGTCAATGGATGATCCTGCCACAAACCACGATGTGAGAGATACTGATATGTCAGAAGCACCTGCTGATGATCCTGATCTGGCTCTGGCTCTACAATTGTCAGTACAGGACAGTACAAAAGACTCGGCTAGCCAGTCAGACATGAGTAAATTGTTGGCTGATCAGTCTTTTGTATCTTCCATCTTAGCATCGCTTCCTGGAGTTGACCCAAATGATCCATCTGTCAAAGATTTGCTTGCATCCATGCAAAATCAATCTGAGCCCCAGCAGAAGAATGAAGACAAACCACCGAGTGAGGAGGAGAAGAAGTA 1364 0.4516 MIKTCCQALASTSPASKAEFSSLFQEHWKRHSVNLALDLWLCFDSKSATMVLEATMICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVRVLVTPTSDLGKILACMHGLEIGGEMNLAAGIQVAQLALKHRQNKKQQQRIIVFTGSPIKHEKKLLEMIGRKLKKNSVALDIVNFGEEDEGKTEKLEALLATVNNNDTSHIVHVPPGPNALSDVLISTPIFTGDGEGGSGFAAAAAAAAAGGVSGFEFGVDPNLDPELALALRVSMEEERARQEAAAKKAAEEAAKQEKGGEQPASSQDATMTERASAATSEADHKTNDLMDDENALLKQALAMSMDDPATNHDVRDTDMSEAPADDPDLALALQLSVQDSTKDSASQSDMSKLLADQSFVSSILASLPGVDPNDPSVKDLLASMQNQSEPQQKNEDKPPSEEEKK 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01511 454 ProSiteProfiles VWFA domain profile. 54 238 IPR002035 -
Bva11g01511 454 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 271 290 IPR003903 -
Bva11g01511 454 MobiDBLite consensus disorder prediction 291 337 - -
Bva11g01511 454 SMART VWA_4 51 224 IPR002035 -
Bva11g01511 454 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 4 HOMOLOG ISOFORM X1 50 454 - -
Bva11g01511 454 Gene3D - 269 355 - -
Bva11g01511 454 SUPERFAMILY vWA-like 53 225 IPR036465 -
Bva11g01511 454 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 4 50 454 - -
Bva11g01511 454 MobiDBLite consensus disorder prediction 309 326 - -
Bva11g01511 454 Coils Coil 281 306 - -
Bva11g01511 454 Pfam von Willebrand factor type A domain 55 164 IPR002035 -
Bva11g01511 454 MobiDBLite consensus disorder prediction 291 307 - -
Bva11g01511 454 CDD VWA_26S_proteasome_subunit 50 237 - -
Bva11g01511 454 MobiDBLite consensus disorder prediction 414 454 - -
Bva11g01511 454 Pfam Ubiquitin interaction motif 341 356 IPR003903 -
Bva11g01511 454 Pfam Ubiquitin interaction motif 273 286 IPR003903 -
Bva11g01511 454 Pfam Ubiquitin interaction motif 374 389 IPR003903 -
Bva11g01511 454 SMART uim 373 392 IPR003903 -
Bva11g01511 454 SMART uim 341 360 IPR003903 -
Bva11g01511 454 SMART uim 271 290 IPR003903 -
Bva11g01511 454 Gene3D von Willebrand factor, type A domain 52 235 IPR036465 -
Bva11g01511 454 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 373 392 IPR003903 -
Bva11g01511 454 MobiDBLite consensus disorder prediction 428 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01511 Bva-Chr11 14389295 14393912 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01511 K03029 - gmx:100814594 693.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00871 08 4468844 4472909 Bva11g01511 11 14389295 14393912 BWGD