Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00871 ATGGTGCTCGAGGCGACAATGATCTGTATTGACAATTCGGAATGGATGCGTAACGGAGATTACGCTCCTTCAAGGTTTCAAGCTCAAGCAGACGCTGTTAATCTTATTTGTGGTGCGAAAACCCAGTCTAATCCAGAAAATACAGTTGGAGTTCTAACAATGGCAGGGAAGGGGGTACGCGTATTGGTCACTCCTACCAGTGACCTGGGCAAGATTTTAGCTTGCATGCATGgacttgAAATAGGTGGTGAGATGAACCTAGCTGCTGGAATTCAGGTGGCGCAATTGGCTCTAAAGCATAGGCAAAATAAGAAGCAGCAGCAAAGGATCATTGTCTTTGCTGGAAGTACTATCAAGCATGAGAAGAAGTTGCTGGAGATGATTGGGAGGAAGTTGAAAAAGAATAGCGTAGCACTTGACATTGTCAATTTTGGTGAAGAAGATGAGGGGAAGACAGAGAAGCTGGAAGCACTCCTTGCAGCTGTTAACAATAACGACACCAGTCATATTGTTCATGTTCCATCAGGGCCAAATGCTCTGTCGGATGTACTTATAAGTACACCTATATTTACTGGTGATGGGGAAGGTGGAAGCGGTTTTGCAGCAGCTGCTGCTGCAGCTGCAGCTGGTGGTGTATCTGGCTTTGAGTTTGGTGTGGATCCGAACTTGGATCCTGaacttgctcttgctctaagAGTTTCAATGGAAGAGGAGAGGGCCAGACAAGAAGCAGCAGCGAAAAAGGCTGCAGAGGAAGCTGCTAAACAGGAGAAAGATGGTGAGCAGCCAGCCAGCTCACAAGATGCAACAATGACTGAACGCACTAGTGCAACTTCTGAAGCTGAGCACAAGACAAATGATATGATGGATGATGAGAATGCTCTACTAAAGCAGGCACTTGCAATGTCAATGGATGATCCTGCCACTAGCCACGATGTAAGAGATACCGATATGTCAGAAGCAGCTGCTGATGATCCTGAGTTGGCTCTCGCTCTACAGTTGTCAGTACAGGACGGTACAAAAGACTCAGCAAGCCAGTCGGACATGACTAAATTGTTGGCTGATCAGTCTTTTGTATCTTCCATCCTAGCATCGCTTCCTGGAGTTGATCCAAATGATCCATCTGTCAAAGATTTGCTGGCTTCCATGCAAAATCAATCTGAGCCCCAGCAGAAGAATAATGAAGACAAACCCCCAAGTGAGGAGAAGAAGTA 1214 0.4522 MVLEATMICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVRVLVTPTSDLGKILACMHGLEIGGEMNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSTIKHEKKLLEMIGRKLKKNSVALDIVNFGEEDEGKTEKLEALLAAVNNNDTSHIVHVPSGPNALSDVLISTPIFTGDGEGGSGFAAAAAAAAAGGVSGFEFGVDPNLDPELALALRVSMEEERARQEAAAKKAAEEAAKQEKDGEQPASSQDATMTERTSATSEAEHKTNDMMDDENALLKQALAMSMDDPATSHDVRDTDMSEAAADDPELALALQLSVQDGTKDSASQSDMTKLLADQSFVSSILASLPGVDPNDPSVKDLLASMQNQSEPQQKNNEDKPPSEEKK 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00871 404 Gene3D von Willebrand factor, type A domain 3 186 IPR036465 -
Bva08g00871 404 SMART VWA_4 2 175 IPR002035 -
Bva08g00871 404 MobiDBLite consensus disorder prediction 242 288 - -
Bva08g00871 404 Pfam Ubiquitin interaction motif 324 338 IPR003903 -
Bva08g00871 404 Pfam Ubiquitin interaction motif 291 306 IPR003903 -
Bva08g00871 404 Pfam Ubiquitin interaction motif 224 237 IPR003903 -
Bva08g00871 404 SUPERFAMILY vWA-like 4 175 IPR036465 -
Bva08g00871 404 MobiDBLite consensus disorder prediction 364 404 - -
Bva08g00871 404 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 4 HOMOLOG ISOFORM X1 1 404 - -
Bva08g00871 404 MobiDBLite consensus disorder prediction 378 393 - -
Bva08g00871 404 Gene3D - 220 305 - -
Bva08g00871 404 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 222 241 IPR003903 -
Bva08g00871 404 ProSiteProfiles VWFA domain profile. 5 189 IPR002035 -
Bva08g00871 404 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 4 1 404 - -
Bva08g00871 404 MobiDBLite consensus disorder prediction 242 262 - -
Bva08g00871 404 Pfam von Willebrand factor type A domain 6 115 IPR002035 -
Bva08g00871 404 SMART uim 291 310 IPR003903 -
Bva08g00871 404 SMART uim 323 342 IPR003903 -
Bva08g00871 404 SMART uim 222 241 IPR003903 -
Bva08g00871 404 CDD VWA_26S_proteasome_subunit 1 188 - -
Bva08g00871 404 Coils Coil 232 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00871 Bva-Chr8 4468844 4472909 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00871 K03029 - gmx:100814594 674.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00871 08 4468844 4472909 Bva11g01511 11 14389295 14393912 BWGD
Bva08g00871 08 4468844 4472909 Bva08g00871 08 4468844 4472909 ECH