Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01415 ATGGCGAGAAGATCCGTACCGGTCCTAAAACAATTATTAGCAAGATCACAATCCTCCGACAATCCCAGAATCATCAATGGCACATGCTCCAGATTCAACCCCAACCGACCCATCACCTACATGCCCCGACCCGGGGACATGCTCCAACACCGCGACGGAGCTCCAAGGGCTGTGACTCTTATACCCGGAGATGGGATCGGACCTCTGGTCACCGGCGCCGTCGAACACGTTATGGCCGCGATGCAAGCGCCGGTTTACTTCGAAAAGTTTGAGGTCAGAGGGGATATGAAGAGAGTGCCGGAGGAGGTAATCGATTCGATAAAGAAGAACAAAGTGTGCTTGAAGGGTGGCTTTGCAATACCCGCAGACGGTGGTGTGAGCTCGTTGAACGTGCAGCTTAGGAAGGAGCTTGATCTATATACTTCGCTTGTGAATTGTTGTAATCTTCCCGGCTTGCCCACGAGGCatgaaaatgttaatattGTTGTGATTAGGGAGAATACGGAGGGGGAATACTCCGGCCTTGAACACGAGGTTGTTCCCGGCGTTGTTGAAAGCCTTAAGATAATAACAAAGTTCTGTTCAGAGCGGATTGCTAAATATGCATTCGAGTGCGCTTACCTTAATAACAGAAAGAAAGTGACAGCTGTGCACAAAGCGAACATTATGAAGCTTGCAGATGGTTTGTTCTTGGAATCTTGCCGTGAGGTTGCCAAAGAATTTCCTGGAATCACATATAATGAAGTTATTGTGGATAACTGCTGCATGCAACTTGTTTCAAAGCCTGAACAGTTTGATGTCATGGTAACACCCAATCTCTATGGAAATCTAATTGCAAATACAGCAGCAGGTCTTATTGGAGGCACAGGAATCATGCCAGGAGGTAATGTGGGTACTGAGTATGCTGTGTTTGAGCAAGGTGCTTCAGCAGGGAATGTTGGTAATGATAAAATagtcaaagaaaagagagcaaACCCTGTGGCTCTGCTGCTCTCATCAGCCATGATGCTTAGACATCTCGAGTTTCCAGCATTTGCTGATCGATTGGAAGCTGCggtgaaaaaaattgtaagagaAGGGAAGTACCGGACAAAGGACATTGGAGGGAAAAACACCACCCAAGAAGTTGTCGATGCAATCATAGATGCTTTAGACTA 1157 0.4529 MARRSVPVLKQLLARSQSSDNPRIINGTCSRFNPNRPITYMPRPGDMLQHRDGAPRAVTLIPGDGIGPLVTGAVEHVMAAMQAPVYFEKFEVRGDMKRVPEEVIDSIKKNKVCLKGGFAIPADGGVSSLNVQLRKELDLYTSLVNCCNLPGLPTRHENVNIVVIRENTEGEYSGLEHEVVPGVVESLKIITKFCSERIAKYAFECAYLNNRKKVTAVHKANIMKLADGLFLESCREVAKEFPGITYNEVIVDNCCMQLVSKPEQFDVMVTPNLYGNLIANTAAGLIGGTGIMPGGNVGTEYAVFEQGASAGNVGNDKIVKEKRANPVALLLSSAMMLRHLEFPAFADRLEAAVKKIVREGKYRTKDIGGKNTTQEVVDAIIDALD 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01415 385 TIGRFAM mito_nad_idh: isocitrate dehydrogenase, NAD-dependent 54 383 IPR004434 GO:0006099
Bva11g01415 385 Gene3D Isopropylmalate Dehydrogenase 46 384 - -
Bva11g01415 385 SMART Iso_dh_2 57 380 IPR024084 -
Bva11g01415 385 PANTHER ISOCITRATE DEHYDROGENASE [NAD] REGULATORY SUBUNIT 3, MITOCHONDRIAL 19 383 - -
Bva11g01415 385 Pfam Isocitrate/isopropylmalate dehydrogenase 58 380 IPR024084 -
Bva11g01415 385 PANTHER DECARBOXYLATING DEHYDROGENASES-ISOCITRATE, ISOPROPYLMALATE, TARTRATE 19 383 - -
Bva11g01415 385 SUPERFAMILY Isocitrate/Isopropylmalate dehydrogenase-like 56 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01415 Bva-Chr11 13944941 13948079 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01415 K00030 - csv:101214612 622.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00939 08 4759432 4762731 Bva11g01415 11 13944941 13948079 BWGD