Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01011 ATGTTGGACGGTCGTCCCTGCGTGGTTCCGAGGTTGTTTTCTAGCTCCTGCCAGGCAGAGAACAAGTGGGGTTACATGAACTTCCTGCAGGACTTCGAGATTAAAAATGGCAAGTGCCCTGCAGATGTCGACGGAAACGATGGTCCTAAAAGGGCAGACATAAACCTTACGAATGGCAAGCGGCCATCGGAAATCGGTGGCGAGGATCCATTCCAACCAAGGACATCTGGTAAGAAACTCTGTTCTTGCCGACGAGCTGAAGCTGCTCGACTTTTATTTGAAGAGCAGGTCTTGGATTCATTAGATTCATGTTCACTGAGTCCTCAAATGGATGAGGAGAGCTCCCCCATCCAGAAACTCAGTGAACCATTGAGTAATTGTCAAATAGTTGAGAAGGCTACACCTTCGTCGGATGCACTATCCGATGAACAGCAGCAGTATCATGCTGAGGATTCATTGGATTGTAGTGACTACCAGTCTGATGGACAGCAGTATCATCGCTCTGGGGATTCTTATGATTCTGGAAACGAGGAATCTGAtgagcagcagcagcagcaggaTGCTGAGGATTCAATGGATTCAGGTGACCAGCAATCTGATGAGCAGCAACAGCAAAATGCTGGTAATTCATCAGATTCCGGTTCTCTTTTGCCCCGCCTGAGTCGTGACAGTTCAGTCACCTGTCTTAGCCGCTGTTCAAGGTCTGATTATGGTTCACTTGCCTCACTGAATAGGAGCTTCCGTAACATCATCCGAAGTGGTGAGCTTTATAGATGGAGGCGATTGAATGGCATCATTGAACAttgggtttatttttcttgtgccCTCCTTGAGTGGGAAGCCTATGATCCAAATCGCCAAAGGTGGATGCATTTACCAAGGATGGCTTCCAATGATTGCTTCATGTGTTCAGATAAGGAGTCCTTGGCTGTTGGTACTGAACTTCTTGTATTTGGGAGGGAGCTGACGTCCCATGTCATTTACAGATACAGCCTTTTGACAAACTCATGGACATCTGGAATGAGGATGAATGCTCCAAGGTGCTTGTTTGGGTCTGCTAGTCTTGGAGAGATTGCAATTTCAGCTGGTGGTTGCGATTCTGAGGGACGAATTCTAAGCTCTGCAGAACTATATAATTCTGAAACTCAAACTTGGGAATTACTCCCAAGCATGAATAAGCCCAGGAAGATGTGTTCTGGGGTGTTTATGGATGGAAAGTTTTATGTTATTGGGGGAATTGGAGGAAGTGAGGCCAAGCTTCTGACATGTGGAGAGGAATACAATATACAGACTAGAACATGGACAGAAATCCCTGACATGTCCCCTGGACGAAGGGGGGCAGATATGCCTGCAGCAGCCGAGGCACCACCACTGGTTGCTGTTGTAGATAACGAATTGTATGCTGCTGATTATGCTGACATGGAGGTTAAAAAGTATGATAAGGAGAGAAAATTGTGGAATGTCATTGGGAGATTGCCTGAAAGGATAGTGTCGATGAACGGCTGGGGGCTTGCATTCAGGGCTTGTGGAAAAAGGCTTATTGTCATCGGTGGGCCTAGGACTGCCGGCGAGGGTTTCATTGAACTCAATTCATGGGTGCCCAGCGAAGGACCTCCACAGTGGAATCTGCTTGCCAGAAAGAGATCTGGTAACTTCGTCTACAATTGCGCTGTGATGGGATGCTA 1685 0.4593 MLDGRPCVVPRLFSSSCQAENKWGYMNFLQDFEIKNGKCPADVDGNDGPKRADINLTNGKRPSEIGGEDPFQPRTSGKKLCSCRRAEAARLLFEEQVLDSLDSCSLSPQMDEESSPIQKLSEPLSNCQIVEKATPSSDALSDEQQQYHAEDSLDCSDYQSDGQQYHRSGDSYDSGNEESDEQQQQQDAEDSMDSGDQQSDEQQQQNAGNSSDSGSLLPRLSRDSSVTCLSRCSRSDYGSLASLNRSFRNIIRSGELYRWRRLNGIIEHWVYFSCALLEWEAYDPNRQRWMHLPRMASNDCFMCSDKESLAVGTELLVFGRELTSHVIYRYSLLTNSWTSGMRMNAPRCLFGSASLGEIAISAGGCDSEGRILSSAELYNSETQTWELLPSMNKPRKMCSGVFMDGKFYVIGGIGGSEAKLLTCGEEYNIQTRTWTEIPDMSPGRRGADMPAAAEAPPLVAVVDNELYAADYADMEVKKYDKERKLWNVIGRLPERIVSMNGWGLAFRACGKRLIVIGGPRTAGEGFIELNSWVPSEGPPQWNLLARKRSGNFVYNCAVMGC 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01011 561 Pfam Kelch motif 394 441 IPR006652 GO:0005515
Bva11g01011 561 Pfam Kelch motif 346 392 IPR006652 GO:0005515
Bva11g01011 561 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 1 561 - -
Bva11g01011 561 SMART kelc_smart 314 357 IPR006652 GO:0005515
Bva11g01011 561 SMART kelc_smart 362 405 IPR006652 GO:0005515
Bva11g01011 561 SMART kelc_smart 406 454 IPR006652 GO:0005515
Bva11g01011 561 MobiDBLite consensus disorder prediction 151 170 - -
Bva11g01011 561 MobiDBLite consensus disorder prediction 43 77 - -
Bva11g01011 561 MobiDBLite consensus disorder prediction 134 219 - -
Bva11g01011 561 Gene3D - 263 545 IPR015915 GO:0005515
Bva11g01011 561 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP11 1 561 - -
Bva11g01011 561 SUPERFAMILY Kelch motif 276 558 IPR015915 GO:0005515
Bva11g01011 561 MobiDBLite consensus disorder prediction 188 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01011 Bva-Chr11 11787541 11790818 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01011 220 514 Miscellaneous Gene Families AT4G33900 23.392 1.48e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01011 - - gmx:100818865 779.245
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01468 08 7733194 7734261 Bva11g01011 11 11787541 11790818 BWGD
Bva11g01011 11 11787541 11790818 Bva11g01011 11 11787541 11790818 ECH