Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01468 ATGGCTGGGAGTTCATCAGATTCTGGTTCTCTTTTTCCCCGCCTGGATCGTCAAGGCTCGGCCACCTTTATTTGCCGCTGTTCAAGGTCTGATTATGGTTCTGTCGCCTCACTGAATAGGAGCTTTCGTAACATCATCAGAAGTGGTGAGCTTTATAGATGGAGGCGAGTGAATGGCATCAGTGAACATTGGGTTTATTTTACTTGCCACCTCCTTGAATGGGAAGCCTATGATCCAAATCGCCAACGTTGGATGCATTTACCAAGGATGGCTTCCAGTGATTGCTTCATGTGTTCAGATAAGGAGTCCTTGGCTGTGGGTACTGAACTTCTTGTATTTGGGAGGGAGCTGACATCCCATGTTATTTACAGATATAGCCTTTTGACGAATTCGTGGACATCGGGAATGAGGATGAATGCCCCAAGATGCTTATTTGGGTCTGCTAGCCTTGGAGAGATTGCAATTTTAGCTGGTGGTTGTGATTCTGAGGGACGCATTCTTAGTTCTGCGGAACTATATAATTCTGAGACTCAAACTTGGGAATTACTCCCAAGCATGAATAAGCCCAGGAAGATGTGTTCTGGGGTGTTTATGGATGGAAAGTTTTATGTTATTGGGGGAAATGGAGGAAGTTATGCCAAGCTTCTTACATGTGGAGAGGAATACAATTTGCAGACTAGAACATGGAGAGAAATTCCTAACATGTCCCCTCGACGAAGGGGGGCAGATACGCCTGCAGCTGCACCACCTTTGGTTGCTGTTGTAAATGATGAATTGTATGCTGCTGATTGTACTGGCATGGAGGTTATAAGGTATGACAAGGATAGAAATATTTGGTATATCATTGGGAGAATGCCCGAAAGAATGGTATCGATGAATGGCTGGGGTCTTGCATTCAAGGGTTGTGGAAACAGGCTTATCGTAATCGGTGGTGGGTCTTTGATTTCTGGTGAGAATTTCATTGAAGTTAATTCATGGGAGCCCAGAGAAGGACCTCTACAATGGAACCTAATTACCAGAAAGAGATCTGGTAACTTCGTCTATAATTGCGGTGTGATGGGATGCTG 1067 0.447 MAGSSSDSGSLFPRLDRQGSATFICRCSRSDYGSVASLNRSFRNIIRSGELYRWRRVNGISEHWVYFTCHLLEWEAYDPNRQRWMHLPRMASSDCFMCSDKESLAVGTELLVFGRELTSHVIYRYSLLTNSWTSGMRMNAPRCLFGSASLGEIAILAGGCDSEGRILSSAELYNSETQTWELLPSMNKPRKMCSGVFMDGKFYVIGGNGGSYAKLLTCGEEYNLQTRTWREIPNMSPRRRGADTPAAAPPLVAVVNDELYAADCTGMEVIRYDKDRNIWYIIGRMPERMVSMNGWGLAFKGCGNRLIVIGGGSLISGENFIEVNSWEPREGPLQWNLITRKRSGNFVYNCGVMGC 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01468 355 Pfam Kelch motif 141 187 IPR006652 GO:0005515
Bva08g01468 355 Pfam Kelch motif 189 236 IPR006652 GO:0005515
Bva08g01468 355 SUPERFAMILY Kelch motif 71 326 IPR015915 GO:0005515
Bva08g01468 355 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 3 355 - -
Bva08g01468 355 SMART kelc_smart 153 200 IPR006652 GO:0005515
Bva08g01468 355 SMART kelc_smart 201 257 IPR006652 GO:0005515
Bva08g01468 355 SMART kelc_smart 109 152 IPR006652 GO:0005515
Bva08g01468 355 Gene3D - 59 350 IPR015915 GO:0005515
Bva08g01468 355 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP11 3 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01468 Bva-Chr8 7733194 7734261 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01468 22 243 EF-hand Containing Proteins AT4G39560 24.215 3.72e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01468 - - gmx:100791897 580.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01468 08 7733194 7734261 Bva11g01011 11 11787541 11790818 BWGD
Bva08g01468 08 7733194 7734261 Bva08g01468 08 7733194 7734261 ECH