Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00928 ATGGCTCATTTGACaccattatttttgtttctgttaaCACTTCATCTATCAGTATCAGGAGTAATTTCAACGACATTCACAATAGTGAACAAATGTGACTATACAGTATGGCCAGGCATCCTTTCAAACGCTGGAGTTGCCCCTCTTTCCACCACCGGCTTCGTTCTTCGAACGGGTGAATCCAAGACAATCGACGCACACACCTCATGGGGAGGTCGCTTCTGGGGTCGAACTAGCTGCACCCAAGACTCCACCGGGAAGTTTTCCTGCGTCACAGCTGACTGCGGATCAGGGAAGCTAGAATGCTCCGGAAATGGAGCCACACCACCGGCCACCTTGGCCGAGTTCACTTTAGACGGAGCCGGTGGCCTGGATTTCTTCGATGTGAGCTTGGTAGACGGCTATAACGTCCCCATGCTGGTTGTTCCACAAGGTGGTTCCGGCCCCAATTGCACATCCACCGGTTGCGTTGGGGATCTGAACGGCGCGTGTCCTTCAGAGCTCAAGGTTATGAGCGTGGATGGCAAACAAGGGGTGGCGTGCAAGAGCGCATGCGAAGCCTTCGGCACTCCCCAATACTGTTGCAGTGGCGCGTACGGTACTCCAGACTCTTGCAAACCGTCTTCCTACTCTCAGATCTTCAAGAACGCTTGCCCACGCGCCTACAGTTACGCATACGACGATAAGACCAGCACCTTCACATGTGCCTCCGCAGATTACACTATTACCTTTTGTCCTTCTCCTAATACCAGTCAGAAAGCGTCGCAGGAGCAAAACCCGACACCGGAAAACGCTGCCTCTGGCTCCTCGTTGCTTAACAACGGCTCAATGGTATATGAAGGTGCTTTCGATCAAAGTGACATATCGTGGGCCACGGGTACCAACGTGTTGGAATCCCAAATTATGGCCGGCATTGTCGGCGTCACAGTGGCCTTTTGGTGGTTGAGTCAGCTCTTCTA 959 0.5182 MAHLTPLFLFLLTLHLSVSGVISTTFTIVNKCDYTVWPGILSNAGVAPLSTTGFVLRTGESKTIDAHTSWGGRFWGRTSCTQDSTGKFSCVTADCGSGKLECSGNGATPPATLAEFTLDGAGGLDFFDVSLVDGYNVPMLVVPQGGSGPNCTSTGCVGDLNGACPSELKVMSVDGKQGVACKSACEAFGTPQYCCSGAYGTPDSCKPSSYSQIFKNACPRAYSYAYDDKTSTFTCASADYTITFCPSPNTSQKASQEQNPTPENAASGSSLLNNGSMVYEGAFDQSDISWATGTNVLESQIMAGIVGVTVAFWWLSQLF 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00928 319 Gene3D Thaumatin 24 246 IPR037176 -
Bva10g00928 319 PRINTS Pathogenesis-related protein signature 25 37 IPR001938 -
Bva10g00928 319 PRINTS Pathogenesis-related protein signature 73 84 IPR001938 -
Bva10g00928 319 PRINTS Pathogenesis-related protein signature 125 141 IPR001938 -
Bva10g00928 319 PRINTS Pathogenesis-related protein signature 236 245 IPR001938 -
Bva10g00928 319 ProSiteProfiles Thaumatin family profile. 23 246 IPR001938 -
Bva10g00928 319 Pfam Thaumatin family 30 246 IPR001938 -
Bva10g00928 319 SMART tha2 26 246 IPR001938 -
Bva10g00928 319 CDD TLP-PA 25 245 - -
Bva10g00928 319 ProSitePatterns Thaumatin family signature. 86 102 IPR017949 -
Bva10g00928 319 SUPERFAMILY Osmotin, thaumatin-like protein 24 247 IPR037176 -
Bva10g00928 319 PANTHER OS03G0233200 PROTEIN 5 272 IPR001938 -
Bva10g00928 319 PANTHER BNAA02G17480D PROTEIN 5 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00928 Bva-Chr10 6972555 6974931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00928 8 259 Receptor kinase-like Gene Family AT5G38280 55.859 1.70e-96 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00928 - - gmx:100787631 522.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00928 10 6972555 6974931 Bva13g01577 13 9409540 9412995 ECH
Bva10g00928 10 6972555 6974931 Bva14g02317 14 19982198 19984541 ECH
Bva10g00928 10 6972555 6974931 Bva10g00928 10 6972555 6974931 ECH