Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00549 ATGGAGCAACGATTGCCTGGAAGCAAGTTCAAAAGGGTCTGTGTCTTCTGCGGTAGCAACTCCGGCAACAGACAAGTCTTCAGTGACGCTGCGGTTGAATTGGGCAATGAACTGGTTAGGAAGAAGATAGACTTGGTTTATGGTGGGGGAAGTGTTGGGCTGATGGGTTTAATATCCCAGAGAGTGTACGATGGAGGCTGCCATGTACTCGGGATCATTCCAAAAGCTCTCGTGGCTGTAGAGATATCTGGTAAGACAGTTGGTGAAGTAAGAATTGTTTCTGATATGCATGAGCGTAAAGCTGCAATGGCTCAAGAATCCGACGCATTTATTGCACTCCCAGGAGGATATGGAACCATGGAAGAACTGTTAGAGATGATAACTTGGGCCCAACTTGGAATTCACAAAAAACCGGTTGGTCTCCTGAATGTTGACGGTTACTATAACAGTTTGCTAGCATTATTTGACACGGGCGTTAAAGAAGGCTTCATTAAGCCCGGTGCGCGAGATATAGTTGTCTCTGCGCGAACAGCGAAAGAACTTCTGATGAAATTAGAGTATTATACTCCTTCGCATCAACATGTTGCGCCTCATGAGAGCTGGCAGATGGAACAATTAGGTAATTATCCAAGACAAGAAAACGCAGACTG 650 0.4554 MEQRLPGSKFKRVCVFCGSNSGNRQVFSDAAVELGNELVRKKIDLVYGGGSVGLMGLISQRVYDGGCHVLGIIPKALVAVEISGKTVGEVRIVSDMHERKAAMAQESDAFIALPGGYGTMEELLEMITWAQLGIHKKPVGLLNVDGYYNSLLALFDTGVKEGFIKPGARDIVVSARTAKELLMKLEYYTPSHQHVAPHESWQMEQLGNYPRQENAD 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00549 216 Gene3D - 9 204 - -
Bva10g00549 216 TIGRFAM TIGR00730: TIGR00730 family protein 11 188 IPR005269 GO:0009691|GO:0016787
Bva10g00549 216 PANTHER LOG FAMILY PROTEIN YJL055W 8 206 - -
Bva10g00549 216 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE 8 206 - -
Bva10g00549 216 SUPERFAMILY MCP/YpsA-like 9 186 - -
Bva10g00549 216 Pfam Possible lysine decarboxylase 55 184 IPR031100 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00549 Bva-Chr10 5075208 5077645 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00549 K22522 - gmx:100785484 382.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00549 10 5075208 5077645 Bva06g02246 06 14667748 14670854 BWGD