Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02246 ATGGAGCAAGGCTTCCCTGGAAGTAAGTTCAAAAGGGTCTGCGTCTTCTGCGGCAGCAACTCTGGCAACAGACAAGTCTTCAGTGACGCTGCCGTTGAATTGGGCAATGAACTGGTTAGAAGGAAGATAGACTTGGTTTATGGTGGGGGAAGTGTTGGGCTGATGGGCTTAATATCCCAGAGAGTGTACGATGGAGGCTGCTATGTACTCGGGATCATTCCAAAAGCCCTCATGCCTTTTGAGATATCTGGCGAGACCGTCGGTGAAGTCAGAATTGTTTCTGATATGCATGAGCGTAAAGCCACAATGGCTCGAGAATCTGATGCATTTATTGCCCTCCCAGGAGGATATGGAACCATGGAAGAATTGTTGGAGATGATAGCTTGGGCGCAACTTGGAATTCACAAAAAACCGGTTGGTCTACTGAATGTTGACGGTTATTATAACAGTTTGCTTGCATTATTTGACAATGGCGTTGAAGAAGGCTTCATTAAGCCCGGTGCTCGAAATATAGTTGTCTCTGCGCCAACAGCCAAAGAACTTTTGATGAAGATAGAGCATTACACTCCTTCCCATCAAAATGTTGCTCCTCAAGAGAACTGGCAGATGGAGCAAATAGACTG 623 0.4607 MEQGFPGSKFKRVCVFCGSNSGNRQVFSDAAVELGNELVRRKIDLVYGGGSVGLMGLISQRVYDGGCYVLGIIPKALMPFEISGETVGEVRIVSDMHERKATMARESDAFIALPGGYGTMEELLEMIAWAQLGIHKKPVGLLNVDGYYNSLLALFDNGVEEGFIKPGARNIVVSAPTAKELLMKIEHYTPSHQNVAPQENWQMEQID 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02246 207 Pfam Possible lysine decarboxylase 55 184 IPR031100 -
Bva06g02246 207 Gene3D - 9 204 - -
Bva06g02246 207 SUPERFAMILY MCP/YpsA-like 9 188 - -
Bva06g02246 207 PANTHER LOG FAMILY PROTEIN YJL055W 8 205 - -
Bva06g02246 207 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE 8 205 - -
Bva06g02246 207 TIGRFAM TIGR00730: TIGR00730 family protein 11 188 IPR005269 GO:0009691|GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02246 Bva-Chr6 14667748 14670854 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02246 K22522 - gmx:100785484 369.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00549 10 5075208 5077645 Bva06g02246 06 14667748 14670854 BWGD