Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00517 ATGGCTTCTGTTTCAATGACTGTCTCTCTAACTAGTGGTGCCCAGAACAGAGAAAACCAGCCAAGGTCAGAAGCCTTGTTGGGGGCTTTACCAGTGAAAATTTCAAAGAGAGTGgtttcaaaaccaaattcaaAAGCCAAGCTTGCAATTCAGGCATCTCTGAAGGAGAAAGCAGCGACAGGCCTCACAGCCGCTGCTTTGACAGCCTCCATGGTGATACCCGACGTGGCTCAAGCTGCTGAATATGATTTCTCACCATCTCTTAAGAACTTCTTGCTCAGCATTGTCGCTGGAGGTCTTGTGCTCGCAGCCATATTTGGAGCTGTTATTGGGGTCGCCAACTTTGATCCAGTTAAGAGAGTTTG 365 0.4603 MASVSMTVSLTSGAQNRENQPRSEALLGALPVKISKRVVSKPNSKAKLAIQASLKEKAATGLTAAALTASMVIPDVAQAAEYDFSPSLKNFLLSIVAGGLVLAAIFGAVIGVANFDPVKRV 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00517 121 MobiDBLite consensus disorder prediction 1 22 - -
Bva10g00517 121 PANTHER OS07G0673550 PROTEIN 2 120 - -
Bva10g00517 121 PANTHER OS07G0673550 PROTEIN 2 120 - -
Bva10g00517 121 Gene3D Single helix bin 84 121 - -
Bva10g00517 121 Pfam Photosystem II reaction centre X protein (PsbX) 85 120 IPR009518 GO:0009523|GO:0015979|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00517 Bva-Chr10 4937637 4938287 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00517 - - cit:102612959 146.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00517 10 4937637 4938287 Bva10g00517 10 4937637 4938287 ECH
Bva10g00517 10 4937637 4938287 Bva06g02270 06 14767044 14767771 ECH