Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02270 ATGGCTTCTGTTTCGATGGCTATGTCAGTAACTTGTTCCCAGAACAGGGTAAATCAGCAAAGGTCTGAAGCTTTCTTGAAGGCGTTACCCGTGAAACAATCAAATAGAGTTGTTTCAAAATCCAAGCTTGCAATTGCAATTCAGGCATCATTGAAGGAGAAGGCAGTGACAGGCCTCACAGCGGCTGCTTTGACAGCATCCATGGTGATACCCGAAGTGGCTCAAGCTGCTGGATCTGATGTCTCACCATCTCTTGAGAACTTCTTGCTCAGCATTGTCGCTGGAGGTGTTGTGCTCGCAGCTTTGTTTGGAGCTGTTATTGGGGTTGCCAACTTTGATCCAGTTAAGAGAGTCTG 356 0.4691 MASVSMAMSVTCSQNRVNQQRSEAFLKALPVKQSNRVVSKSKLAIAIQASLKEKAVTGLTAAALTASMVIPEVAQAAGSDVSPSLENFLLSIVAGGVVLAALFGAVIGVANFDPVKRV 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02270 118 Gene3D Single helix bin 80 118 - -
Bva06g02270 118 PANTHER OS07G0673550 PROTEIN 2 117 - -
Bva06g02270 118 Pfam Photosystem II reaction centre X protein (PsbX) 81 117 IPR009518 GO:0009523|GO:0015979|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02270 Bva-Chr6 14767044 14767771 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02270 - - cit:102612959 120.938
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02270 06 14767044 14767771 Bva06g02270 06 14767044 14767771 ECH
Bva10g00517 10 4937637 4938287 Bva06g02270 06 14767044 14767771 ECH