Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00448 ATGGCGTTTTGGAGATCCCTCTCCGTCCGTATGCTGACATTCTCtgtatttcttctctttcttatcCATGGAGGTCACTGCTTTTACCTTCCTGGCGTTGCTCCTCAGGACTTCCAAAAGGGAGATCCATTGCAAGTGAAAGTAAACAAATTAACATCAACAAAGACCCAACTtccttattcattttattcacTTCCTTATTGTCCGCCCAAAAAAATAGTGGATAGTGCAGAGAATCTAGGGGAAGTGCTTCGTGGTGACCGCATTGAGAATTCCCTTTATGTGTTTAAAATGCGTGAGCCACAAATGTGCAATGTTGTGTGTAAGCTGACACTTGATGTGAAAACTACAAAGGAATTTAAAGAGAAGATTGATGATGAGTATCGGGTGAACATGATCCTAGATAACCTCCCTCTGGTTGTTCCCTTAAAACGGGTGGATCAGGATTCTACTGTTTATCAGCTTGGTTTTCATGTTGGACTTAAAGGGCAATATAGCGGGAGCAAGGAGGAGAAGTACTTTATACACAACCATTTGGCATTTACGGTCAAGTATCATAGAGATTCAGTAACTGAATCTGCCAGAATTGTGGGTTTTGAGGTTAAGCCATTCAGTGTTAAACATGAATACGAAGGGAATTGGGATAAGAAGACTCGTTTGACAACCTGTGACCCTCACGCTAAACACACAGTTGTTAACTCCAACACTcctcaagaagttgaagagaaCATGGATATTATATTCACATATGATGTTGAATTCCAGGAGACTGATGTAAAATGGGCTTCAAGATGGGATGCCTATCTGCTGATGAATGATGACCAAATTCATTGGTTCTCGATTGTGAACTCATTGATGATTGTTCTTTTCCTCTCGGGCATGGTGGCAATGATAATGCTTCGTACACTTTACCGTGATATATCAAAGTACAACGAACTTGAGACGCAAGAAGAAGCCCAAGAAGAGACTGGTTGGAAGCTTGTCCATGGCGATGTATTCAGGCCCCCTAACAACTCAGATCTTCTCTGTGTTTATGCTGGAACTGGTGTTCAGTTTTTTGGGATGATACTGGTAACCATGATGTTTGCGATCCTTGGGTTCCTCTCTCCTTCAAACCGAGGTGGGCTAATGACAGCCATGCTTTTGCTTTGGGTATTCATGGGACTTTTTGCTGGTTATGCCTCATCCCGCTTGTACAAAATGTTTAAAGGAACagaatggaagaaaattgCTCTCAGGACGGCCATAGTTTTTCCTGCTGTTGTCTCTgccattttctttgtattaAACGCCATCATATGGGGCCAAAAATCATCTGGAGCTGTGCCATTTGGCACAATGTTTGCACTGATCTTTTTATGGTTTGGGATTTCAGTCCCACTTGTTTTTGTGGGTAGCTATGTTGGTTTCAAGAAGCCTGCAATTGAGAATCCCGTGAAGACAAACAAAATCCCAAGGCAGATCCCCGAGCAGGCCT 1477 0.4035 MAFWRSLSVRMLTFSVFLLFLIHGGHCFYLPGVAPQDFQKGDPLQVKVNKLTSTKTQLPYSFYSLPYCPPKKIVDSAENLGEVLRGDRIENSLYVFKMREPQMCNVVCKLTLDVKTTKEFKEKIDDEYRVNMILDNLPLVVPLKRVDQDSTVYQLGFHVGLKGQYSGSKEEKYFIHNHLAFTVKYHRDSVTESARIVGFEVKPFSVKHEYEGNWDKKTRLTTCDPHAKHTVVNSNTPQEVEENMDIIFTYDVEFQETDVKWASRWDAYLLMNDDQIHWFSIVNSLMIVLFLSGMVAMIMLRTLYRDISKYNELETQEEAQEETGWKLVHGDVFRPPNNSDLLCVYAGTGVQFFGMILVTMMFAILGFLSPSNRGGLMTAMLLLWVFMGLFAGYASSRLYKMFKGTEWKKIALRTAIVFPAVVSAIFFVLNAIIWGQKSSGAVPFGTMFALIFLWFGISVPLVFVGSYVGFKKPAIENPVKTNKIPRQIPEQ 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00448 491 SUPERFAMILY MFS general substrate transporter 278 464 IPR036259 -
Bva10g00448 491 Pfam Endomembrane protein 70 59 491 IPR004240 GO:0016021
Bva10g00448 491 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 10 491 IPR004240 GO:0016021
Bva10g00448 491 PANTHER TRANSMEMBRANE 9 SUPERFAMILY MEMBER 10 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00448 Bva-Chr10 4614790 4619277 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00448 1 491 Miscellaneous Gene Families AT5G10840 81.363 0.0 817
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00448 K17086 - gmx:100810506 902.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00448 10 4614790 4619277 Bva06g02328 06 15039124 15042423 BWGD
Bva10g00448 10 4614790 4619277 Bva10g00448 10 4614790 4619277 ECH