Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02328 ATGGCGTTTTGGAGATCTCTCTTCGTCCGTGCATTAACCTTCTGttcatttcttctcttccttatCCATGGAGGTCACTGCTTTTACCTCCCCGGCGTCGCTCCACAGGACTTCCAAAAGGGAGATCCATTGCAAGTGAAAGTAAACAAATTAACGTCAATAAAGACTCAACTtccttattcattttattcacTTCCATATTGTCGGCCTGGAAAAATAGTGGATAGTGCAGAAAATCTTGGGGAAGTGCTTCGTGGTGACCGCATTGAAAATTCCGTTTATGTGtttAAAATGCGTGAGCCACAAATGTGCAATGTTGTGTGTAAGCTGAAACTCGATGCAAAAACTGCAAAGGAATTTAAAGAGAAGATTGATGATGAGTATCGGGTGAACATGATCCTAGATAACCTACCTCTGGTTGTTCCCATAAAGCGAATGGATCAGGATTCTACTGTTTATCAGCTTGGTTTCCATGTTGGACTTAAAGGGCAATACAGTGGAAGCAAGGAGGAGAAGTATTTTATACACAACCATTTGGCATTTACGGTCAAGTATCACAGAGATTCGCTAACTGAATCTGCCAGAATTGTGGGTTTTGAGGTTAAGCCATTCAGTGTTAGACATGAATATGAAGGGAAATGGGATGAGAAGACTCGTTTGATAACATGCGACCCTCATGCTAAACACACAGTTGTTAACTCCAACACTCCAcaagaagttgaagagaaCAAGGAAATTATATTCACATATGACGTTGAATTCCAGGAGAGTGATGTGAAATGGGCCTCAAGATGGGATACCTATCTGCTGATGAGCGATGACCAAATTCATTGGTTCTCAATTGTGAACTCGTTGATGATCGTTCTCTTCCTCTCGGGCATGGTGGCAATGATAATGCTTCGAACACTTTACCGTGATATTTCAAAGTACAATGAACTTGAGACGCAAGAAGAAGCCCAAGAAGAGACTGGTTGGAAGCTTGTCCATGGTGACGTATTCAGGCCCCCTAACAACTCAGATCTTCTCTGTATTTACGCTGGAACTGGTGTTCAATTTTTTGGGATGATGCTAGTAACCATGTTATTTGCCATCCTTGGGTTCCTCTCTCCTTCAAACCGAGGTGGGCTAATGACAGCCATGCTTTTGCTTTGGGTCTTCATGGGGCTTTTTGCTGGTTATGCCTCATCTCGCTTGTACAAAATGTTTAAAGGATCGGAGTGGAAGAAAATTGCTCTCAGGACGGCCCTCGTTTTCCCTGCTATTGTCTCTGCCATTTTCTTTGTACTAAACGCTCTCATATGGGGCCAAAAATCATCTGGAGCTGTACCATTTGGCACAATGTTTGCTCTGATCTTTTTATGGTTTGGGATTTCAGTCCCACTTGTTTTTGTGGGTAGCTATGTTGGTTTCAGGAAGCCTGCAATTGAGAATCCCGTGAAGACAAACAAAATCCCAAGGCAGATCCCTGAGCAGGCCTGGTACATGAACCCTATCTTCTCAATTCTGATTGGTGGAATCCTCCCATTCGGAGCCGTTTTCATTGAGCTTTTCTTCGTCCTGACCTCAATCTGGTTGAATCAGTTTTACTACATCTTCGGGTTCCTCTTCCTGGTCTTCATCATCCTCATCGTCACCTGCGCCGAAATAACCATTGTGCTCTGCTACTTTCAGTTGTGCAGTGAGGATTACTTATGGTGGTGGCGCTCATACCTCACCTCTGGCTCTTCCGCACTTTATCTGTTCCTCTATGCGACATTCTACTTCTTCACCAAGCTTGAAATCACTAAGTTGGTGTCTGCGATATTATACTTCGGTTACATGCTTATAGCTTCTTATGCATTTTTTGTGGTAACCGGTACCATTGGATTCTATGCATGCTTTTGGTTCACAAGGCTCATCTACTCTTCggtgaaaattgatta 1922 0.4188 MFALIFLWFGISVPLVFVGSYVGFRKPAIENPVKTNKIPRQIPEQAWYMNPIFSILIGGILPFGAVFIELFFVLTSIWLNQFYYIFGFLFLVFIILIVTCAEITIVLCYFQLCSEDYLWWWRSYLTSGSSALYLFLYATFYFFTKLEITKLVSAILYFGYMLIASYAFFVVTGTIGFYACFWFTRLIYSSVKID 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02328 194 PANTHER TRANSMEMBRANE 9 SUPERFAMILY MEMBER 1 194 - -
Bva06g02328 194 Pfam Endomembrane protein 70 1 150 IPR004240 GO:0016021
Bva06g02328 194 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 1 194 IPR004240 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02328 Bva-Chr6 15039124 15042423 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02328 1 194 Miscellaneous Gene Families AT5G10840 92.784 1.86e-128 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02328 K17086 - gmx:100780976 372.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00448 10 4614790 4619277 Bva06g02328 06 15039124 15042423 BWGD
Bva06g02328 06 15039124 15042423 Bva06g02328 06 15039124 15042423 ECH