Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00447 ATGAAGTTTATGAAGCTGGGTTCGAAGCCTGACGCTTTTCAGGCTGACGGGAAGTGTCTCAGGTATGTGTCATCTGAATTGGCTACAGATATCATTATAAATGTTGGTGAAATAAAGTTTTACCTTCACAAGTTCCCTTTACTGTCCAAGAGCAATCGATTGCAAAAGCTGGTAACAAAGGCTAATGAAGAGAATTCTGATGAAATCTGTTTGGCTGATTTCCCCGGCGGACCCAAAGCCTTTGAAATATGTGCAAAATTCTGCTATGGAATGACTGTTACTCTTAATGCTTACAATGTAGTAGCTGCTCGTTGTGCAGCTGAGTACCTTGAGATGATTGAGGATGTTGACAGaggaaacttaatttttaaaattgaggtGTTTCTCAACTCGGGTATTTTTCGTAGCTGGAAGGATTCCATAAATGTTCTTCAAACTACTAAATCTCTTCTGCCATGGTCTGACGATCTGAAGATAGTTGGAAGATGCATAGATTCCATAGCTTCTAAAACTTCTGTGGATCCATCAAACATCACATGGTCCTACACGTATAACCGGAAATTAACAGAGtctgataaaataattgaggACAAGCAGACATTTCAGGAGAAAATTGAGTCTGTTCCAAAGGATTGGTGGGTTGAAGATTTATGCGAGCTGGACATTGATCTTTACAAGCGAGTCATGATTGCGGTGAAATCAAAGGGAAGAATGGATGGCGTTTTGATTGGGGAAgctctaaaaatatatgcagTCAGATGGTTACCTGATTCTGTTGATGCATTGGTTTCTGATGCCTATGCACGGAGGAATAAATCTCTTGTAGAAACCATTGTCTGTTTATTGCCATCAGACGGTGGTGTGGGCTGTTCATGTAGCTTCTTGCTAAAGCTATTGAAAGTGGCCATATTAGTTGAAGCAGATGAGTcatcaagaaaagaattgaTGAAGTGTATCAGCCTGAAATTGCATGAAGCTTCTGTCAAAGATTTATTGGTCCCAGCAAGGTCTCCCCAGATTACCAAGTATGATGttcaattagttcaatgtctTTTGAATCTACACCTGGCTTATGAAAAAGGCAGGTGGGATATGGAAGTTGTTGGGAAAAACGAAAAAGAGTATGACAAATCTACTTCAGGGCATAGTTCCTTATTCAACGTTGCCAAGTTGGTGGATAATTATCTTGCAGAAATTGCACATGATCCAAATCTCAGCCTCTCTAGCTTTGTTGACTTGTCACAGTCAATTCCAGAGTCTGCTAGACCAAGTAATGATGGTCTGTACAGAGCTATTGACATTTACTTGAAGGAACACCCGAGTTTGAACAAAGctgaaaggaagaagatatgTGGACTGATGGACGTGAAGAAATTGTCAGGGGAAGCATCCATGCATGCTGCACAAAACGAGCGCCTTCCCCTTAGAGTCGCAGTGCAGGTTCTCTTTTTTGAGCAGGTTAGAGCTTCTTCCACAGTCCTGAGCAATAATTCCCGTGCTCCTTCCCACTCGGTGACGAGTGCAGATGAAGAATGTGAGAAAACGGAGGCAGATGCCTGCCAATCCCTCAATGAACAGATGAATCAGTGTCAGTTGAAGATTACAGGAGAAGAGTACGACAAGAATTTGAGCAAGAAGAGCAGCAAAAACAGCAGAAGTGGCATGCAATTGCTGCCGTCTAGAtcaagaagaatatttgatAAGCTATGGGTTGTGGGTAAAGGACAAGGAGAGAACAGGAGTTGTCAGACTTCAGGGAGTTCTAATAGTCCAACTTCTTTAGTACCTGTCCCTGTAAATACCAAATCATCTGGTTCATCCTCGAGACACCGGAGGCATTCTATCTCTTG 1850 0.3962 MKFMKLGSKPDAFQADGKCLRYVSSELATDIIINVGEIKFYLHKFPLLSKSNRLQKLVTKANEENSDEICLADFPGGPKAFEICAKFCYGMTVTLNAYNVVAARCAAEYLEMIEDVDRGNLIFKIEVFLNSGIFRSWKDSINVLQTTKSLLPWSDDLKIVGRCIDSIASKTSVDPSNITWSYTYNRKLTESDKIIEDKQTFQEKIESVPKDWWVEDLCELDIDLYKRVMIAVKSKGRMDGVLIGEALKIYAVRWLPDSVDALVSDAYARRNKSLVETIVCLLPSDGGVGCSCSFLLKLLKVAILVEADESSRKELMKCISLKLHEASVKDLLVPARSPQITKYDVQLVQCLLNLHLAYEKGRWDMEVVGKNEKEYDKSTSGHSSLFNVAKLVDNYLAEIAHDPNLSLSSFVDLSQSIPESARPSNDGLYRAIDIYLKEHPSLNKAERKKICGLMDVKKLSGEASMHAAQNERLPLRVAVQVLFFEQVRASSTVLSNNSRAPSHSVTSADEECEKTEADACQSLNEQMNQCQLKITGEEYDKNLSKKSSKNSRSGMQLLPSRSRRIFDKLWVVGKGQGENRSCQTSGSSNSPTSLVPVPVNTKSSGSSSRHRRHSIS 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00447 616 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN NPY1 4 595 IPR029961 GO:0060918|GO:0099402
Bva10g00447 616 MobiDBLite consensus disorder prediction 576 616 - -
Bva10g00447 616 CDD BTB_POZ_NPY3-like 21 124 - -
Bva10g00447 616 Pfam NPH3 family 211 464 IPR027356 -
Bva10g00447 616 MobiDBLite consensus disorder prediction 577 605 - -
Bva10g00447 616 Gene3D Potassium Channel Kv1.1; Chain A 13 118 IPR011333 -
Bva10g00447 616 ProSiteProfiles BTB domain profile. 29 97 IPR000210 GO:0005515
Bva10g00447 616 SUPERFAMILY POZ domain 21 114 IPR011333 -
Bva10g00447 616 PANTHER OS12G0117600 PROTEIN 4 595 IPR043454 -
Bva10g00447 616 ProSiteProfiles NPH3 domain profile. 211 488 IPR027356 -
Bva10g00447 616 Pfam BTB/POZ domain 25 113 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00447 Bva-Chr10 4605100 4609827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00447 22 506 EF-hand Containing Proteins AT3G44820 33.915 1.93e-90 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00447 - - gmx:100790291 927.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00447 10 4605100 4609827 Bva06g02329 06 15045792 15049799 BWGD
Bva10g00447 10 4605100 4609827 Bva10g00447 10 4605100 4609827 ECH