Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02329 ATGAGTAACAGAGGCTTAGAGCAATTTATGAAGTTGGGTTCGAAGCCTGACGCTTTTCAAGCTGACGGGAAGTGCATCAGGTATGTGTCATCTGAATTGGCCACAGATGTCATCATAAATATTGGTGAAGTAAAGTTTTACCTTCATAAGTTCCCTTTACTGTCCAAGAGCAATCGATTGCAAAAGCTGGTAACGAAGGCTAATGAGGAGAATTCCGATGAAATCTATTTGGATGATTTCCCTGGCGGGCCCAAAGCCTTTGAAATATGTGCTAAATTCTGCTATGGAATGACCGTTACCCTTAATGCGTACAATGTTGTAGCTGCTCGTTGTGCAGCGGAGTACCTTGAGATGACTGAGGATATTGACAGAGGAAActtaatctttaaaattgaGGTGTTTCTCAACTCGAGTATCTTTCGTAGCTGGAAGGATTCCATAAATGTTCTCCAAACTGCTAAATCTGTTCTGCCATGGTCTGAAGATCTGAAGATTGTTGGGAGATGCATAGATTCCATAGCTTCTAAAACTTCTATGGACCCATCAAACATCACATGGTCCTATACCTATAACCGGAAATTAACAGAACCTGACAAAATAATTGAGGACAAGCCGACATTTCAAGGGAAAGTCGAGTCTGTTCCTAAGGATTGGTGGGTTGAAGATATATGCGAGCTGGACATCGATCTTTACAAGCGAGTCATGATTGCAGTGAAATCAAAGGGAAGAATGGATGGCGTTGTGATCGGGGAGGCATTAAAAATCTATGCAGTCAGGTGGTTACCTGATTCTGTTGATGCATTGGTTTCTGATGCCCATGCCCAGAGGAACAAATCTCTTGTAGAAACCATTATCTGTTTATTGCCATCAGACAGTGGCGTGGGATGTTCATGTAGCTTCTTGCTAAAGCTATTGAAAGTGGCCATATTAGTTGAAGCAGACGAGTCATCAAGAGAAGAATTGATGAAAAGTATCAGCCTGAAATTGCATGAAGCTTCTGTCAAAGATTTATTGGTCCAAGCAAGGTCTTCTCAGATTACCATATATGATGTTCAATTGGTACAAAATCTTTTGAATCTACACCTGACTTGCGGAAAGGGCAACTGGGTTACGGAAGTTgttgagaagaaagaaaaagaatatgacaAATCTTTTTATGGGCATAGGTCCTTATTCAATGTTGCCAAGTTGGTGGATAATTATCTTGCAGAAATCGCACATGATCCAAATCTCAGCCTCTCTACTTTTGTTGACTTGTCACAGTCGATTCCAGAGTCTGCTAGACCAAATCATGATGGTCTGTACAGAGCCATTGACACCTACTTGAAGGAACACCCCAGTTTGACAAAAGctgaaaggaagaagatatgTGGACTGATGGATGTCAAGAAATTGTCAGGGGAAGCATCCATGCATGCTGCACAAAATGAGCGCCTTCCACTTAGAGTTGTAGTGCAGGTTCTCTTTTTTGAGCAGGTTAGAGCTTCTGCCACTCTAAGCTATAATTGCCGTGCTCCTTCCAACTCGGCGATGAGTGTAGATGAAGAATGTGAGAACACGATGGGTGAGGCCGGCCAATTCCTGGAGAAACAGACGAATCAGTTGAAGATTAAAGGTAAAGAGTTccacaaaaatggaaaactgAGCAAGAAGAGTAGCATAAACGGCAGAAGTGGCATCCAATTACTGCCGTCTAGAtcaagaagaatatttgatAAGCTATGGGTTGTCGGAAAAGGACTAGGGGTTGAGAACAGGAGTTCTGACACTTCAGGGAGTTCTAATAGTCCAACTTCTGTAGTCCCTGTTCCTGTAGATACCAAATCATCTGGTTCATCCTCAAGACACAGGAGGTATTCTGTATCTTA 1868 0.4042 MSNRGLEQFMKLGSKPDAFQADGKCIRYVSSELATDVIINIGEVKFYLHKFPLLSKSNRLQKLVTKANEENSDEIYLDDFPGGPKAFEICAKFCYGMTVTLNAYNVVAARCAAEYLEMTEDIDRGNLIFKIEVFLNSSIFRSWKDSINVLQTAKSVLPWSEDLKIVGRCIDSIASKTSMDPSNITWSYTYNRKLTEPDKIIEDKPTFQGKVESVPKDWWVEDICELDIDLYKRVMIAVKSKGRMDGVVIGEALKIYAVRWLPDSVDALVSDAHAQRNKSLVETIICLLPSDSGVGCSCSFLLKLLKVAILVEADESSREELMKSISLKLHEASVKDLLVQARSSQITIYDVQLVQNLLNLHLTCGKGNWVTEVVEKKEKEYDKSFYGHRSLFNVAKLVDNYLAEIAHDPNLSLSTFVDLSQSIPESARPNHDGLYRAIDTYLKEHPSLTKAERKKICGLMDVKKLSGEASMHAAQNERLPLRVVVQVLFFEQVRASATLSYNCRAPSNSAMSVDEECENTMGEAGQFLEKQTNQLKIKGKEFHKNGKLSKKSSINGRSGIQLLPSRSRRIFDKLWVVGKGLGVENRSSDTSGSSNSPTSVVPVPVDTKSSGSSSRHRRYSVS 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02329 622 CDD BTB_POZ_NPY3-like 27 130 - -
Bva06g02329 622 SMART BTB_4 35 133 IPR000210 GO:0005515
Bva06g02329 622 ProSiteProfiles BTB domain profile. 35 103 IPR000210 GO:0005515
Bva06g02329 622 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN NPY1 12 607 IPR029961 GO:0060918|GO:0099402
Bva06g02329 622 Pfam NPH3 family 217 470 IPR027356 -
Bva06g02329 622 SUPERFAMILY POZ domain 28 121 IPR011333 -
Bva06g02329 622 MobiDBLite consensus disorder prediction 584 622 - -
Bva06g02329 622 ProSiteProfiles NPH3 domain profile. 217 494 IPR027356 -
Bva06g02329 622 Pfam BTB/POZ domain 31 122 IPR000210 GO:0005515
Bva06g02329 622 PANTHER OS12G0117600 PROTEIN 12 607 IPR043454 -
Bva06g02329 622 Gene3D Potassium Channel Kv1.1; Chain A 22 124 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02329 Bva-Chr6 15045792 15049799 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02329 28 500 EF-hand Containing Proteins AT3G44820 34.331 6.77e-95 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02329 - - gmx:100790291 892.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00447 10 4605100 4609827 Bva06g02329 06 15045792 15049799 BWGD
Bva06g02329 06 15045792 15049799 Bva06g02329 06 15045792 15049799 ECH