Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00444 ATGTCAATTCCGGGTTTTTGTGGTTCATTGGTTGAGTTCGTTTTTAAGAATACAGAGGCTATTCAAGCTAAGGCTGGTAGATATAAAAGCCCTGAAGAAAATCCCTTCTTCCCAGAAAATTTACCGCCCTCAGAGGTGCCATATTACCCCTTCTCAAAGATTTTGCATCCAAAGGCCGCTTTGGTTAACATAAACAAGTCCATTTGGAAGATGTACTTTGATGAGCTGCTGCCCTTGTTTGCTACCTCAGGGGATAATGGCAACTATGCACAAACTGCAGCTAGTGATCTTTTATTATTGCAGGCCATCTCTCGAAGGATTCACTATGGAAAGTTCGTAGCTGAGGTGAAATTCAGGGAATCTCCTCAAGACTATGAGCCTGCAATTCGTGCTCAGGATCAAGAAGCATTAATGAAATTGTTGACATTCGAGAGCGTAGAAGAGATGGTGAGGAAGAGGGTTGAGAAGAAGGCCATGGTGTTTGGGCAAGAGGTGAGCCTTGACTCTGATGAAAGAAACAAGACTAAATACAAGGTTGATCCATCTATAGCTTTTCGCCTGTACGAGCAATGGGTTATTCCTCTTACCAAGCAAGTTGAAGTCGAGTACCTTCTACGCCGCCTCCATTG 629 0.4356 MSIPGFCGSLVEFVFKNTEAIQAKAGRYKSPEENPFFPENLPPSEVPYYPFSKILHPKAALVNINKSIWKMYFDELLPLFATSGDNGNYAQTAASDLLLLQAISRRIHYGKFVAEVKFRESPQDYEPAIRAQDQEALMKLLTFESVEEMVRKRVEKKAMVFGQEVSLDSDERNKTKYKVDPSIAFRLYEQWVIPLTKQVEVEYLLRRLH 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00444 209 Gene3D Chorismate mutase, AroQ class superfamily, eukaryotic 1 209 IPR037039 GO:0004106|GO:0009073
Bva10g00444 209 PANTHER CHORISMATE MUTASE 2 208 - -
Bva10g00444 209 TIGRFAM CM_pl-yst: chorismate mutase 4 208 IPR008238 GO:0004106|GO:0009073
Bva10g00444 209 ProSiteProfiles Chorismate mutase domain profile. 1 209 IPR008238 GO:0004106|GO:0009073
Bva10g00444 209 SUPERFAMILY Chorismate mutase II 2 208 IPR036263 GO:0046417
Bva10g00444 209 PANTHER CHORISMATE MUTASE 2 208 IPR008238 GO:0004106|GO:0009073
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00444 Bva-Chr10 4591700 4594324 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00444 K01850 - gmx:100791341 321.627
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00444 10 4591700 4594324 Bva06g02331 06 15056850 15060758 BWGD
Bva10g00444 10 4591700 4594324 Bva10g00444 10 4591700 4594324 ECH