Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02331 ATGGCGGAAGCAGAATCAAATCCTGACTCGAGGAATGCCTACACGTTAGATTCAGTGAGAGAGGCATTAGTCAGACAAGAAGATACCATCATTTTTAGTCTCATTGAGAGAGCCAAGTTCCCACTTAACTCTCACACCTATGATCAAAATTACATATCAATTCCGGGTTTTTGTGGTTCATTGGTTGAGTTCATTGTTAAGAATACAGAGGCCACTCAAGCTAAGgCTGGTAGATACAAAAGCCCTGAAGAAAATCCCTTCTTCCCGGAAAATTTGTTACCCTCAATGGTGCCATATTACCCCTTCTCAAAGATGTTGCATCCAACGGCAGCTTTGgttaacataaacaaacaCATTTGGAAGATTTACTTTGATGAGCTGCTGCCCTTGTTTGCTGCCTCGGGTGATGATGGCAGCTATGCACAGACTGCAGCTAGTGATCTTTCATTATTGCAGGCCATCTCTAGAAGGATTCACTATGGAAAGTTCGTAGCCGAGGTGAAATACAGGGAATCTCCCGCAGACTATGAGCCTGCAATTCGTGCTCAGGACCAAGAAGCAATGATGAAATTGTTGACATTCGAGAGCGTAGAAGAGATGGTGAGGAAGAGGGTTGAGAAGAAGGCCATGGTGTTTGGGCAACAAGTGAGCCTTGACTCTGATGAAAACAAGGGGAATAAATACAAGGTTGATCTATCCCTAGTTTCTCGTTTGTATAAGCAGTGGGTTATTCCTCTTATACCATCTTTAGTCATGGTGCAGAGCAGCAAGTCCATAGTTGCTCATGCAGCTGTAAAAGTCTATAAAGAGTG 812 0.4273 MAEAESNPDSRNAYTLDSVREALVRQEDTIIFSLIERAKFPLNSHTYDQNYISIPGFCGSLVEFIVKNTEATQAKAGRYKSPEENPFFPENLLPSMVPYYPFSKMLHPTAALVNINKHIWKIYFDELLPLFAASGDDGSYAQTAASDLSLLQAISRRIHYGKFVAEVKYRESPADYEPAIRAQDQEAMMKLLTFESVEEMVRKRVEKKAMVFGQQVSLDSDENKGNKYKVDLSLVSRLYKQWVIPLIPSLVMVQSSKSIVAHAAVKVYKE 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02331 270 PANTHER CHORISMATE MUTASE 9 247 - -
Bva06g02331 270 PANTHER CHORISMATE MUTASE 9 247 IPR008238 GO:0004106|GO:0009073
Bva06g02331 270 Gene3D Chorismate mutase, AroQ class superfamily, eukaryotic 8 250 IPR037039 GO:0004106|GO:0009073
Bva06g02331 270 TIGRFAM CM_pl-yst: chorismate mutase 15 247 IPR008238 GO:0004106|GO:0009073
Bva06g02331 270 SUPERFAMILY Chorismate mutase II 10 246 IPR036263 GO:0046417
Bva06g02331 270 PIRSF Chor_mut_AroQ_eu 2 254 IPR008238 GO:0004106|GO:0009073
Bva06g02331 270 ProSiteProfiles Chorismate mutase domain profile. 7 260 IPR008238 GO:0004106|GO:0009073
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02331 Bva-Chr6 15056850 15060758 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02331 K01850 - gmx:100791341 365.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00444 10 4591700 4594324 Bva06g02331 06 15056850 15060758 BWGD
Bva06g02331 06 15056850 15060758 Bva06g02331 06 15056850 15060758 ECH