Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00394 atggctGCAAATTTCTTCAGAGACAAAATGGAGACTCCTCTTCTTTGCCTCATTTCTGTAATCTTGTCGCTGTTTTTGGTGTCAATTATCTCCACGTTGTACCTTCCTGCTCAGTTCACTGAACTGATGAGGTTCACTACCTCTAAGCCGGAATATTCTATATCAATGGATCAGTTGCGAACTAAGGTCTCCGCTGATCGGAATCAACTCCGAGCTGTGAGTTTCCGTGAACATGGCCATCATCTTCACCAGAGCCAATCCAGAAACCGAACTGCAACTAGGATCGTAAAAAGGCTGAGCAGAGAAGAAATGCTGGAAGAAGGACTTGCTCGCGCCAGAGCATCGATTCGCAGCATAGCAGTAAGCAATCTCTCATTGGCGACTACACACAGCGACGGCGGCGGCGATATCATTCCCGCCGGAGTTGTGTATCGGAACCCGCACTTGTTTTACCAGAGCTACATGGAGATGGAGAAAAGGTTCAAAATATACGTATACCCAGAAGGGGACCTACCAATCACCCACGATGGCCCGTGCAAAGACATATACTCGATTGAAGGGAGGTTCATCCATGAGCTAGAACATGGGGATGGGAGGTTTAGAACCAATGATGCCAATGTAGCTCATGTTTACTTCTTGCCATTCAGTGTGACTTTGATGGTGAAGTACCTCTACACGCCAAACACATACGATGTCAGTCCTTTAAAGCACTATGTCTCTGATTATGTGAGGGTGGTATCCACTAGGTACCCCTTCTGGAATAGAAGTCAAGGTGCCGACCACTTCATGCTCAGCTGCCATGATTGGGGTCCTTTTGCATCCCAGGGCAACCCTTTACTTTTCAATACCTCTATTCGCGTCTTGTGTAATGCCAACGCTTCCGAAGGCTTCGACCCTCGAAAGGATATAAGCCTACCAGAGATCCATCTTTATGGAGGCGTTGTATCACCTAAGCTCCTCTCACCCCCACCGGACCACGCCTCACGTCCCCATCTTGCCTTTTTCGCTGGCGGCTTGCATGGCCCAATCCGCGCCTTCCTCCTCAAGCACTGGAAAAACCGGGACAATGATATACTTGTCTACGAATACCTGCCCAAAAACCTAGACTACTATTCCTTGATGCTCAACTCCAAGTTTTGTCTTTGCCCGAGTGGATACGAAGTGGCTAGCCCTAGACTGGTGGAGTCAATTTACGCCGAATGCGTGCCCGTGATACTATCCAAGAATTATGTGTTGCCGTTTAGCGATGTACTGCGATGGGAGGCGTTCTCTGTTGAGGTACATGTTTCAGATATTCCAAGGTTGAAAGAGGTGCTTAGTGCTATTCCAGAGAGCAAGTATCGGAAACTCAAGGAGGGAGTGAGAGCTGTGAGGAGGCATTTTACGCTGAATCACCCACCAAAGAGATACGATGTCTTCCACATGATCTTACATTCTATATGGCTAAGGAGGTTAAATTTCAGACTCAGATA 1472 0.4749 MAANFFRDKMETPLLCLISVILSLFLVSIISTLYLPAQFTELMRFTTSKPEYSISMDQLRTKVSADRNQLRAVSFREHGHHLHQSQSRNRTATRIVKRLSREEMLEEGLARARASIRSIAVSNLSLATTHSDGGGDIIPAGVVYRNPHLFYQSYMEMEKRFKIYVYPEGDLPITHDGPCKDIYSIEGRFIHELEHGDGRFRTNDANVAHVYFLPFSVTLMVKYLYTPNTYDVSPLKHYVSDYVRVVSTRYPFWNRSQGADHFMLSCHDWGPFASQGNPLLFNTSIRVLCNANASEGFDPRKDISLPEIHLYGGVVSPKLLSPPPDHASRPHLAFFAGGLHGPIRAFLLKHWKNRDNDILVYEYLPKNLDYYSLMLNSKFCLCPSGYEVASPRLVESIYAECVPVILSKNYVLPFSDVLRWEAFSVEVHVSDIPRLKEVLSAIPESKYRKLKEGVRAVRRHFTLNHPPKRYDVFHMILHSIWLRRLNFRLR 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00394 490 PANTHER XYLOGALACTURONAN BETA-1,3-XYLOSYLTRANSFERASE 75 488 - -
Bva10g00394 490 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 75 488 IPR004263 GO:0006486|GO:0016757
Bva10g00394 490 Pfam Exostosin family 158 441 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00394 Bva-Chr10 4331393 4334263 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00394 - - gmx:100820065 667.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00394 10 4331393 4334263 Bva06g02378 06 15327079 15330021 BWGD
Bva10g00394 10 4331393 4334263 Bva10g00394 10 4331393 4334263 ECH