Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02378 atggctGCAAATTTCAtcagagagaaaatggagacTCCTCATTTGTACCTCATTTCTGTAATCCTCTCACTGTTTCTGGTGTCAATCATCGCCATTTTGTACCTTCCACCTCAGTTTACTGAACTGACGAGGTTCACTATCTCGACGCTGGAATATTCCGTGCCATTGGAACAGTTGCGAACTAAGGTCTCTGGTGATCGGAATCAACTCCGAGCTGTAAGTTTCCGTAAAGATGGAGATCATCTTCACCGGAGCAAAGCCAGAAATAGAACTGCGACTAGGATTGTAAAAAAGTTGAGCAGAGAAAAAATGCTGGAAGAAGGACTTGCTCGAGCCAGAGCTTCGATTCGCAGCATAGCAGTAAGCAATCACTCATCGGTGATTTCACACAGCGACGATTACATTCCCGCCGGAGTTGTGTATCGAAATCCGCGCTTATTTTACCGGAGCTACTTGGAGATGGAGAAACGGTTCAAATTATACGTATACCCAGATGGGGACCTACCAATCACCCACGATGGCCCGTGCAAAGACATATACTCGATTGAAGGGAGGTTCATCCATGAGCTCGAACATGGGGACGGGAGGTTTAGAACCAATGATGCCCATGGAGCtcacattttcttcttgcctTTCAGTGTGACGTGGATGGTGAAATACTTCTACACCACAAAAATATACGACGTCAGTCCTTTAAAGCGGTTTGTCTCTGATTATGTGAGGGTGATATCCACTAGGTACCCCTTCTGGAATAGAAGTCAAGGAGCTGACCACTTCATGCTTACCTGCCATGATTGGGGTCCTTTTGCATCACAGGGCAACGCTTTACTCTTCAATAAATCTATTCGCGTCTTGTGCAATGCCAACACTTCCGAAGGCTTCGACCCTCGAAAGGATGTAAGCCTACCAGAAATCCACCTTTATGGAGGCATTGTAAACCCTAAGCTCCTCTCATCCCCATCGGACAATGCCTTACGTCCCAATCTTGCCTTTTTTGCTGGTGGATTGCATGGCCCAATCCGTTCCGTCCTGCTCGACCAATGGAAAGACCGGGACAATGATATACGTGTCTACCAATACCTCCCCAAAGACCTAGACTACTATAGCTTGATGCTCAACTCCAAGTTCTGTCTCTGCCCAAGTGGATATGAAGTGGCAAGCCCTAGACTGGTGGAGGCAATTTACGCGGAATGCGTGCCTGTAATACTATCCAAGTATTATGTGTTACCATTTAGTGATGTGCTACGATGGGAGGCGTTTTCAGTTGAAGTTGATGTTTCAGATATTCCAAGGTTGAAAGAGGTCCTTAGTGCTATTCCAGAGAGCCAGTATCGGAAGCTTAAGGAGGGAGTAAGGGCTGTGAGGCGACATTTTACGCTGAATCACCCAGCAAAGAGATACGATGTCTTCCACATGATCTTACATTCTATATGGTTAAGGAGGCTGAATTTCAGACTTGGATA 1463 0.4484 MAANFIREKMETPHLYLISVILSLFLVSIIAILYLPPQFTELTRFTISTLEYSVPLEQLRTKVSGDRNQLRAVSFRKDGDHLHRSKARNRTATRIVKKLSREKMLEEGLARARASIRSIAVSNHSSVISHSDDYIPAGVVYRNPRLFYRSYLEMEKRFKLYVYPDGDLPITHDGPCKDIYSIEGRFIHELEHGDGRFRTNDAHGAHIFFLPFSVTWMVKYFYTTKIYDVSPLKRFVSDYVRVISTRYPFWNRSQGADHFMLTCHDWGPFASQGNALLFNKSIRVLCNANTSEGFDPRKDVSLPEIHLYGGIVNPKLLSSPSDNALRPNLAFFAGGLHGPIRSVLLDQWKDRDNDIRVYQYLPKDLDYYSLMLNSKFCLCPSGYEVASPRLVEAIYAECVPVILSKYYVLPFSDVLRWEAFSVEVDVSDIPRLKEVLSAIPESQYRKLKEGVRAVRRHFTLNHPAKRYDVFHMILHSIWLRRLNFRLG 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02378 487 Gene3D Glycogen Phosphorylase B; 321 462 - -
Bva06g02378 487 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 81 485 IPR004263 GO:0006486|GO:0016757
Bva06g02378 487 Pfam Exostosin family 155 438 IPR040911 -
Bva06g02378 487 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 325 467 - -
Bva06g02378 487 PANTHER XYLOGALACTURONAN BETA-1,3-XYLOSYLTRANSFERASE 81 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02378 Bva-Chr6 15327079 15330021 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02378 - - gmx:100794890 655.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00394 10 4331393 4334263 Bva06g02378 06 15327079 15330021 BWGD
Bva06g02378 06 15327079 15330021 Bva06g02378 06 15327079 15330021 ECH