Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00390 ATGGCTTCCCACAGACTCTCTGCCGCCATTTTGGTGCTCTCTCTCATTGCCTTCTCGACGGTCACCGATGCTTGTGGCTCATGCAAGCCGCCAGCACCCAAGCCCAACCCCCCACCCAAGCCTTGTCCCACACCACCAGCCCAGGAACATTGCCCCAATGACACATTGAAGCTAGGTGTTTGTGCGGACCTTCTCGGACTTGTTAACGTTGTCATCGGAAATCCTCCTTCTGGCAGCAAGTGCTGTGCATTGTTGGAAGGTTTGGCTGACTTGGAGGCTGCCCTATGCCTGTGCACTGCTATTAAGGCCAATGTGCTCGGCATCAACTTGAACGTGCCTGTTACCCTCAGCTTGCTTCTCAGTGCTTGTCAGAAAACAATTCCTCCTGGTTTCCAATGTGCTTA 404 0.5347 MASHRLSAAILVLSLIAFSTVTDACGSCKPPAPKPNPPPKPCPTPPAQEHCPNDTLKLGVCADLLGLVNVVIGNPPSGSKCCALLEGLADLEAALCLCTAIKANVLGINLNVPVTLSLLLSACQKTIPPGFQCA 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00390 134 CDD HPS_like 51 133 IPR027923 -
Bva10g00390 134 Pfam Hydrophobic seed protein 51 134 IPR027923 -
Bva10g00390 134 Gene3D - 48 134 IPR036312 -
Bva10g00390 134 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 54 133 IPR036312 -
Bva10g00390 134 PANTHER - 28 134 - -
Bva10g00390 134 PANTHER LIPID TRANSFER PROTEIN 28 134 - -
Bva10g00390 134 SMART aai_6 51 133 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00390 Bva-Chr10 4310674 4311340 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00390 51 133 Acyl Lipid Metabolism Gene Families AT4G22490 40.000 8.49e-14 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00390 - - mtr:MTR_3g106750 167.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00390 10 4310674 4311340 Bva06g02382 06 15348100 15348733 BWGD
Bva10g00390 10 4310674 4311340 Bva10g00390 10 4310674 4311340 ECH