Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02382 ATGGCCTCCTACAAGCTCTGTGCCGCCATTTTAGTGCTCTCGCTCGTTGCCTTCTCAGCATTCGCTGATGTAGCCGGCGATAACTGCAAGCCACCATCGCCCAAGCCCAAGCCCGCACCAAGCCCTTCAGCAGAACATTGCCCGAAGGACGCGTTGAAGCTAGGGGTTTGTGCTGACCTTCTGGGACTTATTAGCGTTGTTATTGGAACTCCTCCTTCGGGCGACAAGTGCTGTCCATTGCTGAAAGGTTTGGTTGATTTGGAGGCTGCGGCTTGCCTCTGCATTGCTATTAAGGCCAATGTGCTTGGCATCAACTTGAACGTGCCCGTCACCCTCAGCTTGCTGCTTAGTGCTTGTCAAAAGACACTTCCACCTGGTTTCCAGTGTGCATA 392 0.5332 MASYKLCAAILVLSLVAFSAFADVAGDNCKPPSPKPKPAPSPSAEHCPKDALKLGVCADLLGLISVVIGTPPSGDKCCPLLKGLVDLEAAACLCIAIKANVLGINLNVPVTLSLLLSACQKTLPPGFQCA 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02382 130 CDD HPS_like 47 129 IPR027923 -
Bva06g02382 130 Pfam Hydrophobic seed protein 47 130 IPR027923 -
Bva06g02382 130 Gene3D - 45 130 IPR036312 -
Bva06g02382 130 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 50 129 IPR036312 -
Bva06g02382 130 PANTHER LIPID TRANSFER PROTEIN 28 130 - -
Bva06g02382 130 SMART aai_6 47 129 IPR016140 -
Bva06g02382 130 PANTHER - 28 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02382 Bva-Chr6 15348100 15348733 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02382 37 129 Acyl Lipid Metabolism Gene Families AT4G22490 36.842 4.10e-15 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02382 - - hbr:110654021 167.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00390 10 4310674 4311340 Bva06g02382 06 15348100 15348733 BWGD
Bva06g02382 06 15348100 15348733 Bva06g02382 06 15348100 15348733 ECH