Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00385 ATGGGCGAGAGTAGATTCATACTCGATGATGGCTTTTCCTCAAACGTTTCTGAGGAGACGCCTCGACGATCTTTCGCCTTGTCATTTTCTCCATTGGTGATCATCGACGGCATTTTTTTCAGGAAGAGTTCGTATAATAAGCTTCCCTCGGAACCCCTCAGGCTCTCCGTGCTCAAATTGAATGGCTCTTCTTTCGATATCGAAGTTGCAAAGACAGCCACTATTGCAGAACTTAAGGATGCAGTGGAGGTAGCCTTTAGTCATATGCCTCAGAAGGGGCCAGGAAAAATTTCATGGCACCATGTTTGGGGGCAATTTTGCTTATGTTATGATGGACAGAAGCTAATCACTGAAAGTGATCATCTCAGAAATTATGGCATCAAGGATGGTGATCAGCTTCGTTTCATCCGCCATGTCTCGAGCGATTTCAGTACGAGAAAAAGGCGGTTGAAAAAACGAGTTGTTGTTTCAAAACAACAGAGGATGTCGCAAGTGAGAAGCTATCAACAGAAAAAACATGTCAAGGACGATGGTTCGGATGGCATAGACTTACAGAATCAGCACGAAGATGGTGATGGAGATCCTGAGAACAGGTTAACTGGTTCTGGTTTCTTTGGAGGGTTGTTCTTCTCATACACTCGGCTGGCAATTGTGAGAAGAGTTAGAACTGGAGGCAGGATTTCCCCGACAAGAATTGCCAGACGTTTATTGGGTAGTTTTAGAAAGATGGTATGCTGTTGCAAGGGGAGGCGCTATCCCCGGAGATGTACATGGAGAGAGTGTTG 785 0.4522 MGESRFILDDGFSSNVSEETPRRSFALSFSPLVIIDGIFFRKSSYNKLPSEPLRLSVLKLNGSSFDIEVAKTATIAELKDAVEVAFSHMPQKGPGKISWHHVWGQFCLCYDGQKLITESDHLRNYGIKDGDQLRFIRHVSSDFSTRKRRLKKRVVVSKQQRMSQVRSYQQKKHVKDDGSDGIDLQNQHEDGDGDPENRLTGSGFFGGLFFSYTRLAIVRRVRTGGRISPTRIARRLLGSFRKMVCCCKGRRYPRRCTWREC 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00385 261 SUPERFAMILY Ubiquitin-like 49 142 IPR029071 -
Bva10g00385 261 Gene3D - 48 147 - -
Bva10g00385 261 PANTHER UBIQUITIN-LIKE SUPERFAMILY PROTEIN 10 250 - -
Bva10g00385 261 PANTHER U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 25 KDA PROTEIN 10 250 IPR039690 GO:0000398|GO:0005689
Bva10g00385 261 MobiDBLite consensus disorder prediction 166 196 - -
Bva10g00385 261 MobiDBLite consensus disorder prediction 169 196 - -
Bva10g00385 261 Pfam Ubiquitin-like domain 53 139 IPR040610 -
Bva10g00385 261 CDD Ubl_SNRNP25 53 138 IPR040610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00385 Bva-Chr10 4287743 4290619 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00385 - - gmx:100820296 250.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00385 10 4287743 4290619 Bva06g02388 06 15373681 15376713 BWGD
Bva10g00385 10 4287743 4290619 Bva10g00385 10 4287743 4290619 ECH
Bva10g00385 10 4287743 4290619 Bva06g02388 06 15373681 15376713 ECH