Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02388 ATGGGCGAGATTAGATTGATCATTGACGATGATTTTTCCTCAAACGTTCTCAAGGAGACGCCTCGACGATCTTTCACCTTGTCATTTTCTCCATCGGTGATCATCCATGGCATTTTTTCCATTAAGAGTTTCTCGTATGATAAGCTTCCCTCGGAACCACTCAGGCTTACTGTGCTCAAATTGGATGGCTCTTCCTTCGATATCGAAGTTTCGAGGACTGCCACTATTGCAGAACTTAAGCAGGCGGTGGAAACAGTCTTTAGTCATATGCCTCAGAAGGGGCCAAAGAAAATTTCGTGGCGACATGTTTGGGGACAATTTTGCTTATGTTATGATGGACATAAACTAGTCACTGAAAAAGATCATCTGAGAAATTATGGCATCAAGGATGGTGATCAGCTTCGTTTCATCCGCCATGTCTCGAGCACTTTCAGTATGAGAAAGAAACGATCGAACAAACGAGTTGTTATTTCAAAACTATGCAGGATGTCGCGAGTGAGAAGCTCTCAACAGAAAAAACATGACAACGACAATGATGATGGCAATAATGGCATCTGTTTGGATGAAATAGATTTAGAGAAAGGGAATATCCAGCATGATGAAGATGGCGTTGATAGTCTTGAGAACCAGTTAACTGGTTCTGGTTTTTTGAGGCGGTGGTTCTCATGCAATCGGCTGGCAATTGTGAGAAGTGCTAGAACAGACGGCAGAATTCTCCCCTCAACAATTGCAAGAGGTTTACTGGGTAGATTTGGGAACATCAGAAAGCTTGTATGCTTTTACAGGAGGAGGCGCTATCCTCGGAGATGTACATGGAGAGAGTGTTG 827 0.4317 MGEIRLIIDDDFSSNVLKETPRRSFTLSFSPSVIIHGIFSIKSFSYDKLPSEPLRLTVLKLDGSSFDIEVSRTATIAELKQAVETVFSHMPQKGPKKISWRHVWGQFCLCYDGHKLVTEKDHLRNYGIKDGDQLRFIRHVSSTFSMRKKRSNKRVVISKLCRMSRVRSSQQKKHDNDNDDGNNGICLDEIDLEKGNIQHDEDGVDSLENQLTGSGFLRRWFSCNRLAIVRSARTDGRILPSTIARGLLGRFGNIRKLVCFYRRRRYPRRCTWREC 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02388 275 ProSiteProfiles Ubiquitin domain profile. 54 137 IPR000626 GO:0005515
Bva06g02388 275 CDD Ubl_SNRNP25 54 139 IPR040610 -
Bva06g02388 275 SUPERFAMILY Ubiquitin-like 49 142 IPR029071 -
Bva06g02388 275 Gene3D - 49 149 - -
Bva06g02388 275 PANTHER - 18 272 - -
Bva06g02388 275 PANTHER U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 25 KDA PROTEIN 18 272 IPR039690 GO:0000398|GO:0005689
Bva06g02388 275 Pfam Ubiquitin-like domain 54 140 IPR040610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02388 Bva-Chr6 15373681 15376713 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02388 - - gmx:100820296 247.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00385 10 4287743 4290619 Bva06g02388 06 15373681 15376713 BWGD
Bva06g02388 06 15373681 15376713 Bva06g02388 06 15373681 15376713 ECH
Bva10g00385 10 4287743 4290619 Bva06g02388 06 15373681 15376713 ECH