Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00376 ATGTCAAAGGTCTTCGGCTTTACCGGAGGTGATGATTTTTGCCCTGGGGGGTCAATATACCCTAACCCCAAGGAATCTAGTATCTTCTTGTCTCTTGGCCACCATGTTGATGTTTACTTTCCTACTCGGAAGAGGTCTCGCATCAGTGCTCCATTTGTTTTCAGTGGAGAATGGTTTGAGCAGAAGCAAAAGACATCAATTGGAGCTCTGCCTGATGAATGCCTCTTTGAGATCTTTAGAAGGTTGCCTGGCAGCCAAGAGAGGAGTGCATGTGCTCTTGTTTCTAAGCACTGGCTTATGCTTCTAAGCAATATTTGTAAGGCTGAAATCTGCAGCAACAAAAGCACAGAACATGAGAACGAGGTGAATGAAAAGGAGGTTGATGATCAGAAATTTGGAGGTGATGGATACCTGTCCCGGAgtttggaaggaaagaaagctACTGATATTAGGCTTGCTGCAATTGCTGTTGGGACTGCTTGTCGCGGAGGATTGGGAAAGCTTTCAATCAGGGGAAACAGTTCGGATCGTGGGGTGACTGATATTGGTCTCAAGGCTATATCCCATGGATGCCCTTCTTTAAAGGCTCTTTCACTATGGAATGTTTCTACCATAAGTGATGATGGCCTAGTTGAGATTGCTAATGGATGTCACCAGTTGGAGAAGCTTGACCTTTGTGGGTGTCGCACAATTTCTGACAAGGCTTTAATTGCAATTGCAAAGAACTGTCCAAATCTGACCGAGTTATCAATAGATTCCTGTCCTAGAATTGGTAACGAAGGTCTACAAGCTGTTGGACAGTGGTGCTCCAATCTAAGATCTGTATCAATCAACGACTGCGCCAGTGTTGGTGATCAGGGAATCGCTAACTtgttttcttcaacttcttttgTGCTGTCAAAGGTGAAACTCCAGGCACTGACTATTTCTGACCGGTCTCTTGCTGTTATTGGACATTATGGCATAGCTGTTACTGATCTCGTCCTTAGTTGCCTCCCAAATGTTAGTGAGAGGGGTTTCTGGGTCATGGGTAATGGTCAGGGGTTGCAGAAGTTAAAGTCTCTCACAATTGCATCCTGCCGTGGAGTTACAGATATTGGGCTTGAGGCTGTAGGAAAGGGTTGTCCAAATCTGAAACAATTCAACCTTCGTAAATGTGCGTTTCTATCAGATAATGGTTTGGTGTCATTTTCCAAAGCTGCCTTATCACTTGAGAGCCTGCAATTGGAGGAGTGCCACAGGATCACCCAATTTGGGTTTTTTGGTGTCCTTTTTAACTGTGGTGCGAAATTGAAGGCCCTGGCTTTGCTGAGTTGCTTTGGAATTAAAGATCTGAATTTGGGATTGCCTCCAGTGTCTCCTTGTAACTCACTGCGGTCTTTAACTGTTCGTAACAGCCCTGGATTTGGTAATGCTTCCTTGGCTTTGCTGGGAAAACTGTGCCCTCAGATACAGCATGTTGAATTGAGTGGACTTGAGGGAGTAACGGATGTTGGCATTCTTCCATTGATTGAAAACTGTGAGGCTGGTCTGATTAAGGTTAATCTTAGTGGCTGCGTAAATCTGACAGACAGTGTAGTTTTATCTATGGCAGATCTGCATCATTGGACTCTTGAGGTGCTTAATCTTGATGGCTGTAAGAGGATCACTGATGCAAGCTTGAAAGCTATTGCAGGAAATTGCCCTTTGCTCTCAGATCTTGATGTTTCTAAGTGTGCTGTCTCTGACGCTGGTGTTGCCGCTATGGCATGTGCAAACCAGCTCAATTTGCAGATCCTCTCTCTGTCAGGTTGCTCTTTGGTATCAGACAAGAGCTTGCCCGCTTTGAGAAAATTGGGCCGGACCCTTTTGGGATTAAATATCCAGCACTGTAATGCGATCAGCAGCAGCTCAGTTGACATGCTTGTGGAACTTCTTTGGAGGTGCGACATCCTCTCCTG 1940 0.4438 MSKVFGFTGGDDFCPGGSIYPNPKESSIFLSLGHHVDVYFPTRKRSRISAPFVFSGEWFEQKQKTSIGALPDECLFEIFRRLPGSQERSACALVSKHWLMLLSNICKAEICSNKSTEHENEVNEKEVDDQKFGGDGYLSRSLEGKKATDIRLAAIAVGTACRGGLGKLSIRGNSSDRGVTDIGLKAISHGCPSLKALSLWNVSTISDDGLVEIANGCHQLEKLDLCGCRTISDKALIAIAKNCPNLTELSIDSCPRIGNEGLQAVGQWCSNLRSVSINDCASVGDQGIANLFSSTSFVLSKVKLQALTISDRSLAVIGHYGIAVTDLVLSCLPNVSERGFWVMGNGQGLQKLKSLTIASCRGVTDIGLEAVGKGCPNLKQFNLRKCAFLSDNGLVSFSKAALSLESLQLEECHRITQFGFFGVLFNCGAKLKALALLSCFGIKDLNLGLPPVSPCNSLRSLTVRNSPGFGNASLALLGKLCPQIQHVELSGLEGVTDVGILPLIENCEAGLIKVNLSGCVNLTDSVVLSMADLHHWTLEVLNLDGCKRITDASLKAIAGNCPLLSDLDVSKCAVSDAGVAAMACANQLNLQILSLSGCSLVSDKSLPALRKLGRTLLGLNIQHCNAISSSSVDMLVELLWRCDILS 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00376 646 SUPERFAMILY RNI-like 175 420 - -
Bva10g00376 646 PANTHER UNCHARACTERIZED 16 637 - -
Bva10g00376 646 Gene3D Ribonuclease Inhibitor 252 444 IPR032675 -
Bva10g00376 646 Pfam F-box-like 68 101 IPR001810 GO:0005515
Bva10g00376 646 Gene3D Ribonuclease Inhibitor 165 244 IPR032675 -
Bva10g00376 646 SUPERFAMILY F-box domain 63 104 IPR036047 GO:0005515
Bva10g00376 646 Gene3D Ribonuclease Inhibitor 445 646 IPR032675 -
Bva10g00376 646 PANTHER - 16 637 - -
Bva10g00376 646 SMART LRR_CC_2 587 612 IPR006553 -
Bva10g00376 646 SMART LRR_CC_2 401 426 IPR006553 -
Bva10g00376 646 SMART LRR_CC_2 561 585 IPR006553 -
Bva10g00376 646 SMART LRR_CC_2 538 560 IPR006553 -
Bva10g00376 646 SMART LRR_CC_2 375 400 IPR006553 -
Bva10g00376 646 SMART LRR_CC_2 508 533 IPR006553 -
Bva10g00376 646 SMART LRR_CC_2 217 242 IPR006553 -
Bva10g00376 646 SMART LRR_CC_2 481 506 IPR006553 -
Bva10g00376 646 SMART LRR_CC_2 455 480 IPR006553 -
Bva10g00376 646 SMART LRR_CC_2 269 294 IPR006553 -
Bva10g00376 646 SMART LRR_CC_2 349 374 IPR006553 -
Bva10g00376 646 SMART LRR_CC_2 243 268 IPR006553 -
Bva10g00376 646 SMART LRR_CC_2 191 216 IPR006553 -
Bva10g00376 646 Pfam Leucine Rich repeat 242 265 IPR001611 GO:0005515
Bva10g00376 646 Pfam Leucine Rich repeat 537 558 IPR001611 GO:0005515
Bva10g00376 646 Pfam Leucine Rich repeat 561 583 IPR001611 GO:0005515
Bva10g00376 646 Gene3D - 60 110 - -
Bva10g00376 646 SUPERFAMILY RNI-like 304 645 - -
Bva10g00376 646 SMART fbox_2 70 111 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00376 Bva-Chr10 4231749 4235644 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00376 K14515 - gmx:100820247 1018.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00376 10 4231749 4235644 Bva06g02396 06 15409138 15412776 BWGD
Bva10g00376 10 4231749 4235644 Bva10g00376 10 4231749 4235644 ECH