Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02396 ATGTCAAAGGTCTTCGGCTTTACCGGAGGTGATGATTTTTGCCCTGGGGGGTCATTATACCGTAACCCCAAGGAATCTAGTATCTTCTTGTCTCTTGGCCACCATGTTGATGTTTACTTTCCTCCTCGGAAGAGGTCTCGCATCAATGCTCCATTTGTTTTCAATGAAGAATGGTTTGAGCAGAAGCCGAAGACATCAATTGAAGATCTGCCTGATGAATGCTTCTTCGAGATCTTTAGAAGGTTGCCTGGTGGCCAAGAGAGGAGTGCATGTGCTTGTGTTTCTAAGCGCTGGCTTATGCTTCTAAGCAATATCTGTAAGGATGAAATCTGTAGCAACAAAAACGCTGAACACGAGAACAAGGTGAATGAAAAGGAGGCTGATGATCAGGAATTTGGAGGTGATGGATACCTATCCCGGAgtttggaaggaaagaaagctACTGATGTTAGGCTTGCAGCAATTGCTGTTGGGACTTCTTCTCGTGGAGGGTTGGGAAAGCTTTCAATCCGGGGAAACAATTCAGATCGTGGGGTGACTGATATTGGTCTCAAGGCTATATCCCATGGATGCCCTTCTTTGAAGGCTCTTTCACTATGGAATGTTTCTACTATAAGTGATGATGGCCTAGTTGAGATTGCTAACGGATGTCACCAGTTAGAGAGGCTTGACCTTTTCGGGTGTCGCACAATTTCTGACACGGCCTTAATTTCAATTGCAAAGAACTGTCCAAATCTGACGGAGTTATCAATAGAGTCCTGTTCTGGAATTGGTAATGAAGGTCTACAAGCTGTTGGGCAGTGCTGCCCTAATTTAAGATCTATATCAATCAAGGACTGTGCCCTCGTTGGTGATCAGGGAATTGCTAGCCtgttttcttcaacttcttttgttctttcaaaGGTGAAGCTTCAGGCACTGGCTATTTCTGACCTCTCTCTTGCTGTTATTGGACATTATGGTACAACTGTTACTGATCTTGTCCTTAGTTGCCTCCCAAATGTAAGTGAGAGGGGTTTCTGGGTCATGGGTAATGGTCAGGGGTTGCAGAAGTTAAAGTCACTCACAATTGCATCCTGCCGTGGAGTTACAGATGTTGGAATTGAGGCTGTCGGAAGGGGTTGTCCAAATTTGAAACAATTCAACCTTCGTAAATGTGCATTCCTGTCAGATAATGGTTTGGTGTCATTTTCCAAAGCTGCTTTATCACTTGAGAGCCTGCAATTGGAGGAGTGCCAGCGGATCACCCAATTTGGGATTTTTGGCGTCCTCTTTAACTGTGGTGAGAAATTGAAGGCTCTGGCTTTGGTAAGTTGCTTTGGGATTAAAGATCTGAATTTGGGATTGCCTCCTGTGTCTCCTTGCAAGTCACTGCGATTGTTAACAGTTCGTAACTGCCCTGGATTTGGTAATGCTTCCTTGGCTATGCTGGGAAAGCTGTGCCCTCAGCTTCAGCATGTTGAATTGAATGGACTTGAGGGAGTAACAGATGCTGGCTTTCTTCCATTGATTGAAAACTGCAAGGCTGGTCTGGTTAAGGTTAATCTTAGTGGCTGCATAAATCTGACAGACAAAGTAGTTTTATCCATGGCAGATCTGCATGGTTGGACACTTGAGGTGCTTAATCTTGATGGCTGTAAGGTGACTGATGCAAGCTTGAAAGCTATTGCAGTGAATTGTCCATTGCTCTCTGAACTTGATATTTCCAAGTGTGCTATCTCTGATGCTGGGGTTGCTGCTGTGGCATGTGCAAACCAGCTGAATTTGCAGATCCTCTCTTTGTCAGGTTGCTCTTTGGTGTCCGACAAGTGCCTGCCTGCTTTGAGAAAATTGGGCCAGACCCTTTTGGGATTAAACATCCAGCACTGCAATGCAATCAGCAGCAGCTCTATTGACATGCTTGTGAAACTTCTTTGGAGgtTTCCTTCAATGGGAAATCTGTTCAAGTTGAAGTACCAGTCTCTGCTGCTATTCTTCTGGTTAGTGGTTGCTGTTTGCAGTTCGGAGCTATG 2012 0.4389 MSKVFGFTGGDDFCPGGSLYRNPKESSIFLSLGHHVDVYFPPRKRSRINAPFVFNEEWFEQKPKTSIEDLPDECFFEIFRRLPGGQERSACACVSKRWLMLLSNICKDEICSNKNAEHENKVNEKEADDQEFGGDGYLSRSLEGKKATDVRLAAIAVGTSSRGGLGKLSIRGNNSDRGVTDIGLKAISHGCPSLKALSLWNVSTISDDGLVEIANGCHQLERLDLFGCRTISDTALISIAKNCPNLTELSIESCSGIGNEGLQAVGQCCPNLRSISIKDCALVGDQGIASLFSSTSFVLSKVKLQALAISDLSLAVIGHYGTTVTDLVLSCLPNVSERGFWVMGNGQGLQKLKSLTIASCRGVTDVGIEAVGRGCPNLKQFNLRKCAFLSDNGLVSFSKAALSLESLQLEECQRITQFGIFGVLFNCGEKLKALALVSCFGIKDLNLGLPPVSPCKSLRLLTVRNCPGFGNASLAMLGKLCPQLQHVELNGLEGVTDAGFLPLIENCKAGLVKVNLSGCINLTDKVVLSMADLHGWTLEVLNLDGCKVTDASLKAIAVNCPLLSELDISKCAISDAGVAAVACANQLNLQILSLSGCSLVSDKCLPALRKLGQTLLGLNIQHCNAISSSSIDMLVKLLWRCDILS 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02396 645 Gene3D Ribonuclease Inhibitor 450 645 IPR032675 -
Bva06g02396 645 Gene3D - 60 111 - -
Bva06g02396 645 SUPERFAMILY RNI-like 311 644 - -
Bva06g02396 645 SMART LRR_CC_2 560 584 IPR006553 -
Bva06g02396 645 SMART LRR_CC_2 401 426 IPR006553 -
Bva06g02396 645 SMART LRR_CC_2 269 294 IPR006553 -
Bva06g02396 645 SMART LRR_CC_2 349 374 IPR006553 -
Bva06g02396 645 SMART LRR_CC_2 586 614 IPR006553 -
Bva06g02396 645 SMART LRR_CC_2 243 268 IPR006553 -
Bva06g02396 645 SMART LRR_CC_2 375 400 IPR006553 -
Bva06g02396 645 SMART LRR_CC_2 508 533 IPR006553 -
Bva06g02396 645 SMART LRR_CC_2 455 480 IPR006553 -
Bva06g02396 645 SMART LRR_CC_2 217 242 IPR006553 -
Bva06g02396 645 SMART LRR_CC_2 481 506 IPR006553 -
Bva06g02396 645 SMART LRR_CC_2 535 559 IPR006553 -
Bva06g02396 645 SMART LRR_CC_2 191 216 IPR006553 -
Bva06g02396 645 Pfam Leucine Rich repeat 217 240 IPR001611 GO:0005515
Bva06g02396 645 Pfam Leucine Rich repeat 350 371 IPR001611 GO:0005515
Bva06g02396 645 Pfam Leucine Rich repeat 242 265 IPR001611 GO:0005515
Bva06g02396 645 Pfam Leucine Rich repeat 537 557 IPR001611 GO:0005515
Bva06g02396 645 Pfam Leucine Rich repeat 269 291 IPR001611 GO:0005515
Bva06g02396 645 Pfam Leucine Rich repeat 560 582 IPR001611 GO:0005515
Bva06g02396 645 Gene3D Ribonuclease Inhibitor 242 449 IPR032675 -
Bva06g02396 645 SUPERFAMILY RNI-like 176 420 - -
Bva06g02396 645 Coils Coil 643 645 - -
Bva06g02396 645 PANTHER EIN3-BINDING F-BOX PROTEIN 1 17 636 - -
Bva06g02396 645 Pfam F-box domain 68 106 IPR001810 GO:0005515
Bva06g02396 645 PANTHER UNCHARACTERIZED 17 636 - -
Bva06g02396 645 SUPERFAMILY F-box domain 63 104 IPR036047 GO:0005515
Bva06g02396 645 Gene3D Ribonuclease Inhibitor 159 241 IPR032675 -
Bva06g02396 645 SMART fbox_2 70 111 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02396 Bva-Chr6 15409138 15412776 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02396 K14515 - gmx:100820247 1007.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00376 10 4231749 4235644 Bva06g02396 06 15409138 15412776 BWGD
Bva06g02396 06 15409138 15412776 Bva06g02396 06 15409138 15412776 ECH