Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00301 ATGGAGCTGATGGAAGCTGTGAAATTTAGTAGGCTTCTTGTTCCCTTGTTATTCACTGTACTGATAGCGGATTCCGTAAATGGGATTGGTGTAAATTGGGGCACACAGGCAACACACCCTTTGCCAGCGTCGACGGTGGTGAAAATGCTTAAAGACAATGGTATTCAGAAGGTTAAGCTTTTTGATGCCGATGCCACTATCTTAGATGCTCTGAAGAAGTCTGGCATTCAGGTGATGGTGGGTATTCCAAACGACATGCTCTATACATTGGCTAATAGTGTGGAAGCAGCTGAAAAATGGGTTTCCAAGAATGTTTCCACGCACGTCTCTTCTGGTGGAGTAGACATCAGGTATGTTGCAGTGGGGAATGAACCTTTCTTGTCAACATACAATGGGACCTTTCAAGCCACAACTCTTCCAGCTCTTCAAAATATCCAGTCAGCTCTGATAAAATCTGGTTTGAGCAGTCAGGTCAAAGTGACTGTCCCTTTAAATGCCGATGTATATCAGAGTTCATCAGATAAACCTTCCGACGGGAACTTCCGGTCAGACATCCATGATCTCATGTTGCAGATTGTCAAGTTCTTGAGTGACAATGGAGCTCCATTTACTGTCAACATCTATCCTTTTATCAGCCTCTACAACGATCCCAGTTTTCCCGTTGACTATGCCTTCTTTAATGGCTATCAGACTCCAATAAACGACAACGGAAGGCAATATGAGAATGTGTTTGATGCCAACTATGATACTCTTGTATGGGCATTGCAGAAGAATGGGTTTGGAAACTTGCCCATAATTGTGGGAGAAATTGGGTGGCCTACTGATGGAGACAAAAATGCAAACAATCAATATGCCCAGCGTTTTAACCAAGGCTTTATGTCTCGCTATATTGCCGGAAGAGGAACCCCAATGAGGCCTGGTCCCATGGATGCCTACTTGTTTAGCCTCATAGATGAAGATAATAAAAGCATTCAGCCAGGTAATTTTGAACGTCATTGGGGTCTGTTTTACTACGATGGCACACCCAAATACCAACTTAACCTTGGGACAAGATCCAATGGCTTAGTGGGTGCCAGTGGTGTCCATTATCTGGCCAAGAAGTGGTGTATTTTGAATCCATCAGCAAACCTTAACAATGATCAAGTGGCACCTAGTGTAGACTATGCATGCCAAAATGCTGATTGCACCAGTCTTGGCTATGGGACTTCGTGTGGCAATTTAGACGCTCGAGGCAATATCTCTTATGCGTTCAACAGCTACTTCCAGGTAAATGACCAGATTGACAGTGCCTGCAAATTCCCGGGTCTTTCAGTTGTTACTGACAGAGATCCTTCAACGGGAGATTGCAAATTCAAGATCATGATACAGACAGATTCTGCTCGTCTTAGAAAGCCTGTTGGCTTGTTGCTCtttgcatttttgttttttactatTCTGTATAATCTTCGATTTTA 1454 0.4305 MELMEAVKFSRLLVPLLFTVLIADSVNGIGVNWGTQATHPLPASTVVKMLKDNGIQKVKLFDADATILDALKKSGIQVMVGIPNDMLYTLANSVEAAEKWVSKNVSTHVSSGGVDIRYVAVGNEPFLSTYNGTFQATTLPALQNIQSALIKSGLSSQVKVTVPLNADVYQSSSDKPSDGNFRSDIHDLMLQIVKFLSDNGAPFTVNIYPFISLYNDPSFPVDYAFFNGYQTPINDNGRQYENVFDANYDTLVWALQKNGFGNLPIIVGEIGWPTDGDKNANNQYAQRFNQGFMSRYIAGRGTPMRPGPMDAYLFSLIDEDNKSIQPGNFERHWGLFYYDGTPKYQLNLGTRSNGLVGASGVHYLAKKWCILNPSANLNNDQVAPSVDYACQNADCTSLGYGTSCGNLDARGNISYAFNSYFQVNDQIDSACKFPGLSVVTDRDPSTGDCKFKIMIQTDSARLRKPVGLLLFAFLFFTILYNLRF 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00301 484 SMART X8_cls 367 451 IPR012946 -
Bva10g00301 484 ProSitePatterns Glycosyl hydrolases family 17 signature. 263 276 IPR000490 GO:0004553|GO:0005975
Bva10g00301 484 Gene3D Glycosidases 27 354 - -
Bva10g00301 484 SUPERFAMILY (Trans)glycosidases 29 347 IPR017853 -
Bva10g00301 484 Gene3D - 363 461 - -
Bva10g00301 484 Pfam X8 domain 367 436 IPR012946 -
Bva10g00301 484 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 16 461 IPR044965 GO:0004553|GO:0005975
Bva10g00301 484 Pfam Glycosyl hydrolases family 17 29 347 IPR000490 GO:0004553|GO:0005975
Bva10g00301 484 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 5 16 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00301 Bva-Chr10 3809496 3812723 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00301 12 479 Glycoside Hydrolase AT4G31140 70.378 0.0 706
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00301 K19893 - gmx:100796552 809.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02462 06 15698682 15701779 Bva10g00301 10 3809496 3812723 BWGD