Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02462 ATGAAGCTGATGAAAGGTGTAAAATTTAGTGGGCTTCTTGTTCCCTTGTTATTCACTGCGCTGTTAGCGGGTTCAGTCAATGGGATTGGTGTAAATTGGGGCACACAGGCAACGCACCCTTTGCCAGCGTCGACGGTGGTGAAAATGCTTAAAGACAACGGTATTCAGAAGGCTAAGCTTTTTGATGCCGATGCCAGCATTTTGGGTGCTTTGAAGAAGTCTGGGATCCAGGTGATGGTGGGTATTCCAAATGACATGCTCTATACACTGGCTAATAGTAGGCAAGCAGCTGAAAAATGGGTTTCCAAGAATGTTTCCGCTCACGTCTCTTCTGGCGGAGTAGACATCAGGTATGTTGCAGTGGGGAATGAACCTTTCTTGTCAACATACAATGGCACATTTGAAGCCACAACTCTTCCAGCAATGCAAAATATCCAGTTAGCTCTGATAAAATATGGTTTGAGCAATCAGGTCAAAGTCACTGTCCCTTTAAATGCTGATGTATATCAGAGTTCATCGGATAAACCTTCCGACGGCAACTTCCGGTCAGATATCCATGATCTCATGGTGCAGATTGTCAAGTTCTTGAGTGACAATGGAGCTCCATTTACTGTCAACATCTATCCTTTCATCAGTCTCTACAACGATCCCAGTTTTCCTGTTGACTATGCCTTCTTTAATGGGTACCAGACTCCAATAGATGACAATGGAAAGGAATACGACAATGTGTTTGATGCCAACCATGATACCCTCGTATGGGCATTGCAGAAGAATGGTTACGGAAACTTGCCCATAATTTTGGGAGAAATTGGGTGGCCGACTGACGGAGACCGAAATGCAAATAATCAATATGCCCAACGTTTTAACCAGGGCTTCATGTCTCGCTATATTGCCGGAAGAGGAACCCCAATGAGGCCTGGTCCTATGGATGCCTACCTCTTTAGTCTCATAGATGAAGACAATAAAAGCATTCAGCCAGGTAATTTTGAACGTCACTGGGGACTGTTTTACTATGATGGCTCACCCAAATACCAACTTAATCTTGGGACAAGATCCAATGCCAATGGCTTAGTGGGTGCCACTGGTGTCCATTATCTGGCCAAGAAGTGGTGTATTTTGAAGCCATCAGCAAACCTCAATAATGATCAAGTGGCACCAAGTGTGGCTTATGCATGTCAAAATGCTGATTGCACCAGCCTTGGCTATGGGACTTCATGTGGTAATTTAGACATTCAGGGTAATATCTCTTACGCATTCAATAGCTATTTCCAGATAAATGACCAGATTGACACTGCCTGCAAGTTCCCGGGTCTTTCAGTTGTTACCGATAAAGATCCTTCAACGGGAGACTGCAGATTCAAAATCATGATCCAGACGGATTCTGCTCAGATTAGAAAGCCTGTTGGGTTAATGCTCTTTGTAGTTTTGTTCTTTGCTATTCTGTA 1445 0.4388 MKLMKGVKFSGLLVPLLFTALLAGSVNGIGVNWGTQATHPLPASTVVKMLKDNGIQKAKLFDADASILGALKKSGIQVMVGIPNDMLYTLANSRQAAEKWVSKNVSAHVSSGGVDIRYVAVGNEPFLSTYNGTFEATTLPAMQNIQLALIKYGLSNQVKVTVPLNADVYQSSSDKPSDGNFRSDIHDLMVQIVKFLSDNGAPFTVNIYPFISLYNDPSFPVDYAFFNGYQTPIDDNGKEYDNVFDANHDTLVWALQKNGYGNLPIILGEIGWPTDGDRNANNQYAQRFNQGFMSRYIAGRGTPMRPGPMDAYLFSLIDEDNKSIQPGNFERHWGLFYYDGSPKYQLNLGTRSNANGLVGATGVHYLAKKWCILKPSANLNNDQVAPSVAYACQNADCTSLGYGTSCGNLDIQGNISYAFNSYFQINDQIDTACKFPGLSVVTDKDPSTGDCRFKIMIQTDSAQIRKPVGLMLFVVLFFAIL 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02462 481 ProSitePatterns Glycosyl hydrolases family 17 signature. 263 276 IPR000490 GO:0004553|GO:0005975
Bva06g02462 481 Gene3D Glycosidases 27 355 - -
Bva06g02462 481 SMART X8_cls 369 453 IPR012946 -
Bva06g02462 481 Pfam Glycosyl hydrolases family 17 29 347 IPR000490 GO:0004553|GO:0005975
Bva06g02462 481 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 5 17 462 - -
Bva06g02462 481 Gene3D - 365 464 - -
Bva06g02462 481 SUPERFAMILY (Trans)glycosidases 29 347 IPR017853 -
Bva06g02462 481 Pfam X8 domain 369 438 IPR012946 -
Bva06g02462 481 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 17 462 IPR044965 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02462 Bva-Chr6 15698682 15701779 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02462 3 481 Glycoside Hydrolase AT4G31140 67.146 0.0 694
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02462 K19893 - gmx:100790297 808.135
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02462 06 15698682 15701779 Bva10g00301 10 3809496 3812723 BWGD