Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00204 ATGGTGAATTCGTTGGTAGAAAGAGCCACGAGCGACTTGCTCATCGGCCCTGATTGGGCCAAGAATATCGAGATCTGTGACATGCTGAATCACGATCCTGGGCAAGCAAAGGATGTTGTTAAAGGTATAAAGAAGCGGATTGGGAGTAAGAATTCAAAAGTTCAACTTCTTGCATTAACTCTATTGGAAACACTCATAAAGAATTGTGGCGACATTGTTCACATGCATGTAGCAGAGAGAGATGTCCTGCATGAGATGGTCAGAATAGCAAAGAAGAAGCCCGATTTGCAAGTTAGAGAGAAGATACTCAGCCTTATAGATACTTGGCAAGAGGCATTTGGAGGACCGAGGGCAAGATATCCACAGTACTATGCTGCATACCAGGAATTGTTGCGTGCTGGGGCAGTATTTCCTCCAAGGTCTGAGCGATCTGCTCCCGTGTTTACACCTCCCCAAACACAACCATTGGCTTCATATCCTCAAAATTTACGTAATTCTGATTTTCAGCAGGACACAGCTGAGTCTTCAGCAGAGTCCGAGTTTCCTACTCTAAGTTTGACCGAAATTCAGAATGCACGAGGTATTATGGATGTTCTTGCAGAAATGCTCAGTGCAATAGACCCGGATAACAAAGAAGGCCTTAGGCAGGAGGTTATTGTTGATTTGGTGGAGCAATGTCGAACATACAAGCAGAGAGTGGTACACCTTGTTAACTCAACTTCGGACGAATCACTGCTTTGCCAAGGACTGGCTCTGAATGATGATTTGCAGCGTGTACTCGCCAAGCATGAATCCATTGCTTCAGGCTCAGGACCATCTGTTCAAAATCAAACAGAGAAATCTAAGCCTGCACCTGCTGGGGCACTTCTAGATGTTGGTGATCCTTTGGTTGATACTGGAGATGCTAGCAAACAAACTGTTGGGAGACCCCCTTCCAGTGCTGATGCAGGGGCTCAAACATTTAATCAGCTATTGCTTCCTGCACCCAATGCGCCTAATGGTTCAGCTCCACCTGCTAAGGCTGATCCCAAAATTGATCTGCTCAGTGGTGATGATTATAGCTCACCAAAAGCAGAGACTTCGCTTGCTCTTGTTCCTGTAGGAGAACAGCAGTCAGCCAGTCCTGTGTCACAGCAGAATGCCCTTGTTCTTTTTGACATGTTTTCTGATGGTAACAGTGCACGAAATTCCATCAATACCCAGCCAGCTAATGTTGCTGGCCAAACCAGTCTCTTAGTCCCTCAGTTTCAGCAGCAGCAGGCAGCCCCTCAGTTTCAGCAACAGCAGGCAGCCCCTCAGTTTCAGCAGCAGCAGTCAGCCCCTCAGTTTCCGCAACAGCAGGCAGCCCCTCAGTTTCAGCAACAGCAGGCAGCCCCTCAGTTTCAGCAACAGCAAGCAGCCCCTCAGTTTCAGCAACAGCAGGCAGCCCCTCAGTTTCAGCAGCAGCAGGTTTTTATGTCTCCTCAAGGTGGACTTTACCCTAATGGAGGTTCCCCAAATATGGGGTCACCTCGGTATGAGCAGTCACTATACTCCCAAAGCTCAGGTTCTGCCTGGAATGGTCAGGTTGCACAGCAGCAACAGCCACCTTCAGCCACTTATGGTGCACCGAGCAATGGATCATTGCCACCACCTCCGTGGGAAGTTCAACCAACAACAGATAATGGTAGCCCTGTTGCAGGTACTCAATATCCTCAACAAATGCAAGTCACTCAAGTGGTTATGACACATGTTCAGAGTGGTGCACATCCTCAGGGGCCTCAAGCAATCGGGAACGACCAGATGGCTGGTATGTACATGCAGCAGCCAAATACTAACAGCCATATGCCAGCAATTAATAGCCATGTCGGTCAAAACAATCAGGTGGGTTTGCCCCCTCAGTATATTCAGGGAGGTGCAGGGCCCTATATGGGTATGGTTCCACATCAAATGCTAGCTGGTCCTATGGCATCCGTGTATCCTCAACAGGTTTATGGCAACCAATTCACAGGATATGGCTATGGTCAGCAGCAAGGACTTCAATACGTTGAGCAGCAACTGTACGGTTTATCTGTTAGAGATGACAGTGGTTTGAGCAACTCCTACCGGGTTTCTGCTTCAACTTACGTGCCTTCGGGAAAGCCTTCCAAGCCAGAGGACAAGTTATTTGGGGACCTTGTTGACATGGCAAAAGTGAAGCCAACACCCACTCCAGGCAAAGCTGGTAGCTTGTA 2213 0.4822 MVNSLVERATSDLLIGPDWAKNIEICDMLNHDPGQAKDVVKGIKKRIGSKNSKVQLLALTLLETLIKNCGDIVHMHVAERDVLHEMVRIAKKKPDLQVREKILSLIDTWQEAFGGPRARYPQYYAAYQELLRAGAVFPPRSERSAPVFTPPQTQPLASYPQNLRNSDFQQDTAESSAESEFPTLSLTEIQNARGIMDVLAEMLSAIDPDNKEGLRQEVIVDLVEQCRTYKQRVVHLVNSTSDESLLCQGLALNDDLQRVLAKHESIASGSGPSVQNQTEKSKPAPAGALLDVGDPLVDTGDASKQTVGRPPSSADAGAQTFNQLLLPAPNAPNGSAPPAKADPKIDLLSGDDYSSPKAETSLALVPVGEQQSASPVSQQNALVLFDMFSDGNSARNSINTQPANVAGQTSLLVPQFQQQQAAPQFQQQQAAPQFQQQQSAPQFPQQQAAPQFQQQQAAPQFQQQQAAPQFQQQQAAPQFQQQQVFMSPQGGLYPNGGSPNMGSPRYEQSLYSQSSGSAWNGQVAQQQQPPSATYGAPSNGSLPPPPWEVQPTTDNGSPVAGTQYPQQMQVTQVVMTHVQSGAHPQGPQAIGNDQMAGMYMQQPNTNSHMPAINSHVGQNNQVGLPPQYIQGGAGPYMGMVPHQMLAGPMASVYPQQVYGNQFTGYGYGQQQGLQYVEQQLYGLSVRDDSGLSNSYRVSASTYVPSGKPSKPEDKLFGDLVDMAKVKPTPTPGKAGSL 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00204 737 SUPERFAMILY GAT-like domain 142 269 - -
Bva10g00204 737 ProSiteProfiles VHS domain profile. 9 138 IPR002014 GO:0035091|GO:0043130
Bva10g00204 737 ProSiteProfiles GAT domain profile. 180 268 IPR004152 GO:0035091|GO:0043130
Bva10g00204 737 SUPERFAMILY ENTH/VHS domain 3 138 IPR008942 -
Bva10g00204 737 MobiDBLite consensus disorder prediction 423 538 - -
Bva10g00204 737 Pfam GAT domain 194 268 IPR004152 GO:0035091|GO:0043130
Bva10g00204 737 Pfam VHS domain 3 129 IPR002014 GO:0035091|GO:0043130
Bva10g00204 737 Gene3D - 183 273 IPR038425 -
Bva10g00204 737 MobiDBLite consensus disorder prediction 142 162 - -
Bva10g00204 737 CDD VHS 2 132 - -
Bva10g00204 737 CDD GAT_GGA_like_plant 188 266 - -
Bva10g00204 737 PANTHER TARGET OF MYB PROTEIN 1 456 731 - -
Bva10g00204 737 PANTHER TOM1-LIKE PROTEIN 456 731 IPR044836 GO:0035091|GO:0043130|GO:0043328
Bva10g00204 737 SMART VHS_2 2 134 IPR002014 GO:0035091|GO:0043130
Bva10g00204 737 MobiDBLite consensus disorder prediction 146 162 - -
Bva10g00204 737 MobiDBLite consensus disorder prediction 268 282 - -
Bva10g00204 737 PANTHER TOM1-LIKE PROTEIN 1 488 IPR044836 GO:0035091|GO:0043130|GO:0043328
Bva10g00204 737 Gene3D - 1 148 IPR008942 -
Bva10g00204 737 MobiDBLite consensus disorder prediction 264 317 - -
Bva10g00204 737 MobiDBLite consensus disorder prediction 423 562 - -
Bva10g00204 737 PANTHER TARGET OF MYB PROTEIN 1 1 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00204 Bva-Chr10 3331925 3338427 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00204 - - gmx:100809022 647.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00204 10 3331925 3338427 Bva06g02898 06 18111388 18116201 BWGD
Bva10g00204 10 3331925 3338427 Bva10g00204 10 3331925 3338427 ECH