Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00162 ATGGACCGTTTACGTCCTCGGAACAGACCACTCTTTTCTGGGTTTACAAATGCCGAGAttgagaaaatggagaaagtgCTGAGGGATTCAGGAGAGCAATCTTTGAACAGGGAATTTTGCCAAAGGATGGCAACAGGCTTTAACCGCTCATCTGGTCGTGCTGGTAAACCTGTCATAAAATGGATTGAGATACAAAATTGGTTCCAGAACAGGCTACAGAACTCACCAAAAGTTGGCTCTGAAAATAAGGAAGGAGAAATTATTCGAGACTCATCAGAGTTGGAATTTGAGGCAAGATCATCAAAAGATGGAGCATGGTATGATGTTGAGATGTTCCTTGCTCACAGATTTCTTAGCACAGGCGAAGCTGAAGTCCGTGTCAGATTTGTCGGATTTGGAGCCGAGGAAGATGAGTGggtcaatataaaaaatgcagTCAGAGAACGTTCAGTCCCTGTGGAACATACAGAATGTTCCAAACTGAAAGTTGGAGACCTTGTCCTATGCTTCCAGGAGAGGAGAGATCAAGCTATCTTCTATGATGCTCACGTTGTAGAGATCAACAGGAAGATACATGATATCAGAGGCTGCAGGTGCCTCTTCATAATCCGGTATAACCACGACAACAGTGAGGAAAAAGTTCGCTTGAGGAGACTTTGTTGGAGACCGAATCGCTA 677 0.421 MDRLRPRNRPLFSGFTNAEIEKMEKVLRDSGEQSLNREFCQRMATGFNRSSGRAGKPVIKWIEIQNWFQNRLQNSPKVGSENKEGEIIRDSSELEFEARSSKDGAWYDVEMFLAHRFLSTGEAEVRVRFVGFGAEEDEWVNIKNAVRERSVPVEHTECSKLKVGDLVLCFQERRDQAIFYDAHVVEINRKIHDIRGCRCLFIIRYNHDNSEEKVRLRRLCWRPNR 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00162 225 Pfam SAWADEE domain 93 220 IPR032001 GO:0003682
Bva10g00162 225 Gene3D - 153 225 - -
Bva10g00162 225 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 9 76 IPR039276 -
Bva10g00162 225 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 82 224 IPR039276 -
Bva10g00162 225 PANTHER OS09G0346900 PROTEIN 9 76 - -
Bva10g00162 225 PANTHER OS09G0346900 PROTEIN 82 224 - -
Bva10g00162 225 Gene3D - 91 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00162 Bva-Chr10 3106249 3109710 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00162 - - zju:107420391 356.295
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00162 10 3106249 3109710 Bva10g00162 10 3106249 3109710 ECH
Bva10g00162 10 3106249 3109710 Bva06g02568 06 16237219 16240691 ECH