Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02568 ATGGAACGTTTACGTCCTCGGAACAGACCACTCTTTTCTGGGTTTACAAATGCTGAGAttgagaaaatggagaaagtgCTGAGGGATTCAGGAGAACAATCTTTGAACTGGGAATTTTGCCAAAAGATGGCAGCAAGCTTTAACCGCTCATCTGGTCGTGCTGGTAAACCTATCATAAAATGGATTGAGataaaaaattggTTCCAGTATAGGCTACAAGACTCACCAAAAGTTGGCTCTGAAAATAAGGAAGGAGAAATTGTCCGAGACCAATCAGAGTTAGAATTTGAGGCAAGGTCATCAAAAGATGGGGCATGGTAtgatgtggagatgtttgttGATCACAGATTTCTTAGCACTGGCGAACctGAAGTCCTAGTCAGATTTGTTGGTTATGGAGCCGAGTATGATGAGTGggtcaatataaaaaaagcaGTAAGAGAACGTTCAGTGCCTTTGGAACATACAGAATGTTCCAAACTGAAAGCTGGAGACCTCGTCCTGTGCTTGCAGGAGAGGAGAGATCAAGCAATCTTCTATGATGCCCACATTGTAGagatcaaaaggaaaatgcatGATATCAGAGGTTGCAGATGTCTCTTCATAATCCGGTATAACCATGATAACTGTGAGGAACAAGTTCGCTTGATTAAACTTTGTTGGAGGCCGAATCGCCCGGTGAATAAGCTGTG 692 0.3829 MERLRPRNRPLFSGFTNAEIEKMEKVLRDSGEQSLNWEFCQKMAASFNRSSGRAGKPIIKWIEIKNWFQYRLQDSPKVGSENKEGEIVRDQSELEFEARSSKDGAWYDVEMFVDHRFLSTGEPEVLVRFVGYGAEYDEWVNIKKAVRERSVPLEHTECSKLKAGDLVLCLQERRDQAIFYDAHIVEIKRKMHDIRGCRCLFIIRYNHDNCEEQVRLIKLCWRPNRPVNKL 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02568 230 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 9 76 IPR039276 -
Bva06g02568 230 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 82 224 IPR039276 -
Bva06g02568 230 Gene3D - 153 225 - -
Bva06g02568 230 Pfam SAWADEE domain 93 220 IPR032001 GO:0003682
Bva06g02568 230 Gene3D - 91 152 - -
Bva06g02568 230 CDD CD_CSD 107 140 - -
Bva06g02568 230 PANTHER OS09G0346900 PROTEIN 9 76 - -
Bva06g02568 230 PANTHER OS09G0346900 PROTEIN 82 224 - -
Bva06g02568 230 SUPERFAMILY Chromo domain-like 103 143 IPR016197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02568 Bva-Chr6 16237219 16240691 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02568 - - zju:107420391 337.035
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02568 06 16237219 16240691 Bva06g02568 06 16237219 16240691 ECH
Bva10g00162 10 3106249 3109710 Bva06g02568 06 16237219 16240691 ECH