Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00152 ATGACAATGAGTTCCGGTGATATTCATATGAAGATCGTTCATGGGGATGGTGGTTACATCCTCCAAGACATTCCTCACTTCTCCGACTATATTCCTAGCCTTCCtACGTATCCAAATCCGCTGCGATCCAATCCAGCTTACTCAGTTGTCAAGCAGTATTTTGTTGACGTGGATGACACCGTTCCTCAGAAGGTTGTGGTTCACAAGGATGGTCCAAGAGGCGTTCATTTTCGACGTGCAGGACCCCGCCAAAAGGTGTATTTTAAATCGGATGACGTGCATGCATGTATTGTTACATGTGGTGGTCTTTGCCCTGGGCTCAACACTGTCATAAGGGAAATTGTCTGTAGCCTTTCTTATATGTATGGAGTCAACAAAGTCCTTGGTATAGATGGTGGTTATAGAGGTTTCTATTCCAAGAATACCATTACTTTAACACCCAAGGTGGTTAATGATATCCATAAGCGTGGGGGTACCATTCTTGGGACATCACGAGGAGGGCATGACACTGCAAAGATAGTTGACAGCATCCAGGATCGTGGAATTAATCAGgttattattattggagGAGATGGAACTCAGAGAGGAGCATCTGTGATTTATGAGGAAATCAGACGGCGTGGTCTCAAAGTAGCAATTGCTGGGATTCCTAAAACCATAGATAACGATATCCCGGTTATCGATAGGTCCTTCGGTTTTGATACTGCGGTTGAGGAGGCTCAACGTGCCATTAATGCAGCTCATGTTGAAGCCGAAAGTGCTGAGAATGGAATTGGTGTTGTAAAGCTGATGGGACGGTACAGCGGATTCATTGCAATGTATGCTACTCTTGCTAGTAGAGACGTGGACTGTTGCTTGATTCCAGAATCACCTTTCTATCTTGAAGGGAAGGGTGGACTTCttgaatttattgaaaaaagactaaaagaaAATGGCCATATGGTTTTAGTCATAGCCGAAGGAGCAGGACAAGATCTTCTTACAGAGAGCACGCAACACATGAACCAGAAGGACGCTTCTGGAAACAAGCTACTTCAGGATGTTGGCCTATGGATATCTCACAGGATTAAGGATCATTTTGGGAGGAAAAATAACATGGTGAtcaatcttaaatatatagATCCTACATACATGATCCGGGCAATTCCAAGCATTGCATCCGACAATGTCTATTGCACACTTCTTGCTCAGAGTGCAGTTCATGGGACAATGGCAGGGTATACAGGTTTCACTGTTGGGTTGGTCAATGGCAGACAGACTTATATTCCATTCAATCGAATCACTGAGAGGCAGAACCAGGTTGTTATCACTGATAGGATGTGGGCAAGACTCCTTTCTTCAACCAACCAGCCAAGCTTTATGAATCCAAGAGATGCTAAGGTGGCCAAGAAAACAGAACCTTCGACTCAGCTGTTAGATGGGAACACTCCCAAATATGAACCTAAATCAGAAAATCATACTGACAATCATATTGCAACAAAAAGCTA 1487 0.4257 MTMSSGDIHMKIVHGDGGYILQDIPHFSDYIPSLPTYPNPLRSNPAYSVVKQYFVDVDDTVPQKVVVHKDGPRGVHFRRAGPRQKVYFKSDDVHACIVTCGGLCPGLNTVIREIVCSLSYMYGVNKVLGIDGGYRGFYSKNTITLTPKVVNDIHKRGGTILGTSRGGHDTAKIVDSIQDRGINQVIIIGGDGTQRGASVIYEEIRRRGLKVAIAGIPKTIDNDIPVIDRSFGFDTAVEEAQRAINAAHVEAESAENGIGVVKLMGRYSGFIAMYATLASRDVDCCLIPESPFYLEGKGGLLEFIEKRLKENGHMVLVIAEGAGQDLLTESTQHMNQKDASGNKLLQDVGLWISHRIKDHFGRKNNMVINLKYIDPTYMIRAIPSIASDNVYCTLLAQSAVHGTMAGYTGFTVGLVNGRQTYIPFNRITERQNQVVITDRMWARLLSSTNQPSFMNPRDAKVAKKTEPSTQLLDGNTPKYEPKSENHTDNHIATKS 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00152 495 Pfam Phosphofructokinase 96 401 IPR000023 GO:0003872|GO:0006096
Bva10g00152 495 Gene3D - 90 279 - -
Bva10g00152 495 SUPERFAMILY Phosphofructokinase 28 457 IPR035966 GO:0003872|GO:0006096
Bva10g00152 495 PANTHER - 8 480 - -
Bva10g00152 495 PANTHER ATP-DEPENDENT 6-PHOSPHOFRUCTOKINASE 8 480 - -
Bva10g00152 495 PRINTS ATP-dependent phosphofructokinase family signature 181 197 IPR022953 GO:0003872|GO:0006002|GO:0006096
Bva10g00152 495 PRINTS ATP-dependent phosphofructokinase family signature 214 231 IPR022953 GO:0003872|GO:0006002|GO:0006096
Bva10g00152 495 PRINTS ATP-dependent phosphofructokinase family signature 253 269 IPR022953 GO:0003872|GO:0006002|GO:0006096
Bva10g00152 495 PRINTS ATP-dependent phosphofructokinase family signature 97 116 IPR022953 GO:0003872|GO:0006002|GO:0006096
Bva10g00152 495 PRINTS ATP-dependent phosphofructokinase family signature 232 250 IPR022953 GO:0003872|GO:0006002|GO:0006096
Bva10g00152 495 PRINTS ATP-dependent phosphofructokinase family signature 310 322 IPR022953 GO:0003872|GO:0006002|GO:0006096
Bva10g00152 495 MobiDBLite consensus disorder prediction 449 495 - -
Bva10g00152 495 Coils Coil 237 257 - -
Bva10g00152 495 Hamap ATP-dependent 6-phosphofructokinase [pfkA]. 24 454 IPR012004 GO:0003872|GO:0005524|GO:0006096
Bva10g00152 495 PIRSF ATP_PFK_TP0108 1 458 IPR012004 GO:0003872|GO:0005524|GO:0006096
Bva10g00152 495 MobiDBLite consensus disorder prediction 479 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00152 Bva-Chr10 3046785 3054008 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00152 K00850 - gmx:100803139 882.093
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00152 10 3046785 3054008 Bva10g00152 10 3046785 3054008 ECH
Bva10g00152 10 3046785 3054008 Bva06g02578 06 16285105 16291092 ECH