Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02578 ATGGGTTCCGGTGATCCTCATATGAAGATCATTCATGGAGAGGCCGGTTATATCCTCGAAGACGTTCCTCACTTCTCCGACTATATTCCTAATCTTCTCACGTATCCAAATCTGCTGCGATCCAATCCAGCTTACTCAGTTGTTAAGCAGTATTTTGTTGACGCGGATGATACCGTTCCTCAGAAGGTTGTGGTTCACAAGAGTGGTCCAAGAGGCATTCATTTTCGACGTGCAGGACCACGCCAAAAGGTGTATTTCAAATCGGATGATGTGCTTGCATGCATTGTTACATGCGGTGGTCTTTGCCCTGGGCTCAACACTGTCATAAGGGAAATTGTCTGTGGCCTTTCTTACATGTATGGAGTCAACAAAGTCATTGGTATATATGGTGGTTATAGAGGTTTCTATTCCGATAATACGATTACTTTAACACCCAAGGTGGTTAATGATATCCATAAGCGTGGGGGTACCATTCTTGGGACATCACGAGGAGGGCATGATACTGCAAAGATAGTTGACAGCATCCACGATCGTGGAATTAATCAGGTTTATATTATTGGAGGAGATGGAACTCTGAGAGGAGCATCTGTGATTTATGAGGAAGTCAGGCGGCGCTGTCTGAAAGTAGCAATTGCTGGGATTCCTAAAACAATAGACAATGATATCCCGGTTATTGATAGGTCCTTTGGTTTTGATAGTGCGGTTGAGGAGGCTCAACGTGCCATTAATGCAGCTCATGTTGAAGCTGAAGGTGCTGAGAATGGAATTGGTGTTGTAAAGCTAATGGGGCGTTACAGTGGATTCATTGCAATGTATGCTACTCTTGCTAGTAGAGACGTGGACTGTTGCTTGATTCCAGAGTCACCTTTCTATCTTGAAGGGAAGGGAGGACTTCttgaatttattgaaaaaacaCTAGAAGAAAATGGACATATGGTTATAGTCACAGCTGAAGGAGCAGGACAAGATCTTGTCACAGAGAGTATGCAAGTCATGAACCAGAAAGACGCTTCTGGAAACAAGTTACTTCAGGATGTTGGGCTATGGTTATCTCACAGGATTAAGGATCATtttggaaggaaaaagaacaCGGTCAtcaatcttaaatatatagATCCTACATACATGATCCGGGCAATTCCAAGCAATGCATCCGACAATGTCTACTGTACACTTCTTGCTCAGAGTGCAGTTCACGGGGCAATGGCAGGGTATACAGGTTTCACTGCTGGGTTGGTCAATGGCAGACATACTTATATTCCATTCAATCGAATCACTGAGAGTCACAACCAGGTCGTGATTACTGATAGGATGTGGGCAAGACTTCTTTCGTCAACCAACCAGCCAAGCTTTTTGAATCCCAAAGATGATAATGTGGCCAAGAAAACAGAACTTCCGATTCAGCTGTTAGATGGACAAAAAGATGAACACCAATCAGAAAATCATATTGCAACAAAAAGCTA 1463 0.4217 MGSGDPHMKIIHGEAGYILEDVPHFSDYIPNLLTYPNLLRSNPAYSVVKQYFVDADDTVPQKVVVHKSGPRGIHFRRAGPRQKVYFKSDDVLACIVTCGGLCPGLNTVIREIVCGLSYMYGVNKVIGIYGGYRGFYSDNTITLTPKVVNDIHKRGGTILGTSRGGHDTAKIVDSIHDRGINQVYIIGGDGTLRGASVIYEEVRRRCLKVAIAGIPKTIDNDIPVIDRSFGFDSAVEEAQRAINAAHVEAEGAENGIGVVKLMGRYSGFIAMYATLASRDVDCCLIPESPFYLEGKGGLLEFIEKTLEENGHMVIVTAEGAGQDLVTESMQVMNQKDASGNKLLQDVGLWLSHRIKDHFGRKKNTVINLKYIDPTYMIRAIPSNASDNVYCTLLAQSAVHGAMAGYTGFTAGLVNGRHTYIPFNRITESHNQVVITDRMWARLLSSTNQPSFLNPKDDNVAKKTELPIQLLDGQKDEHQSENHIATKS 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02578 487 PRINTS ATP-dependent phosphofructokinase family signature 230 248 IPR022953 GO:0003872|GO:0006002|GO:0006096
Bva06g02578 487 PRINTS ATP-dependent phosphofructokinase family signature 308 320 IPR022953 GO:0003872|GO:0006002|GO:0006096
Bva06g02578 487 PRINTS ATP-dependent phosphofructokinase family signature 95 114 IPR022953 GO:0003872|GO:0006002|GO:0006096
Bva06g02578 487 PRINTS ATP-dependent phosphofructokinase family signature 179 195 IPR022953 GO:0003872|GO:0006002|GO:0006096
Bva06g02578 487 PRINTS ATP-dependent phosphofructokinase family signature 212 229 IPR022953 GO:0003872|GO:0006002|GO:0006096
Bva06g02578 487 PRINTS ATP-dependent phosphofructokinase family signature 251 267 IPR022953 GO:0003872|GO:0006002|GO:0006096
Bva06g02578 487 PANTHER ATP-DEPENDENT 6-PHOSPHOFRUCTOKINASE 8 475 - -
Bva06g02578 487 MobiDBLite consensus disorder prediction 466 487 - -
Bva06g02578 487 Coils Coil 235 255 - -
Bva06g02578 487 Hamap ATP-dependent 6-phosphofructokinase [pfkA]. 22 452 IPR012004 GO:0003872|GO:0005524|GO:0006096
Bva06g02578 487 Pfam Phosphofructokinase 94 399 IPR000023 GO:0003872|GO:0006096
Bva06g02578 487 PANTHER - 8 475 - -
Bva06g02578 487 SUPERFAMILY Phosphofructokinase 27 452 IPR035966 GO:0003872|GO:0006096
Bva06g02578 487 PIRSF ATP_PFK_TP0108 6 456 IPR012004 GO:0003872|GO:0005524|GO:0006096
Bva06g02578 487 Gene3D - 88 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02578 Bva-Chr6 16285105 16291092 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02578 K00850 - gmx:100803139 836.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02578 06 16285105 16291092 Bva06g02578 06 16285105 16291092 ECH
Bva10g00152 10 3046785 3054008 Bva06g02578 06 16285105 16291092 ECH