Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g02149 ATGAAGAACAATGACCACAACAATCGGGAAGAAGATCAGCAGAACAAAGATAGTACCATAGCAAGCCTAGAGTCCAGATTCAATCAGACTCTCAGGAATGTTCAAGGGTTACTTAAAGGTCGTAGCATTCCtggtaaaatattattgactCAGAGGTCAGACCTGCAAGATAACTCTAACTCAAACGAAAGTTCACCAAATTATAAAAGGAGTTTTTCATACAATGAAGCTCGCACTAGTGGTCACACAGCAGAGGCAGTAGAGGAAGAAGTCTTGAGTACAAGCAAGCCAATTGGTACTACTAATGAGAATACGTTGAAAATATCAACCCCTCACTTAGAAAACAAATCCAAAGAAGTTCAGAAATCTTCCGTGGGTGCTAGAGCTACAGATTCTGCCAGAGTTATGAAGTTCACTAAGGTCCTTTCCGAGACGACAATAATATTAGagAAATTGCGTGAATTAGCTTGGAGTGGTGTGACAGATTACATGCGCCCTACAGTGTGGAGGCTTCTCTTGGGATATGCACCACCTAATTCAGATAGAAGGGAGGGAGTTCTGAGAAGGAAGCGTCTTGAGTACCTTGACTGTGTTTctcaatattataatattcctGATACAGAACGTTCAGATGATGAGATCAACATGCTTCGCCAGATTGCTGTTGATTGTCCAAGAACTGTACCTGATGTTACATTTTTCCAGCAACAGCAAGTTCAGAAATCCTTGGAGCGTATTCTTTATACATGGGCAATTCGGCATCCTGCAAGTGGATATGTTCAGGGGATAAATGATCTTGTTACGCCATTTTTAGTTGTCTTCTTATCAGAATACTTAAAAGGGGGTATAGATAACTGGTCGATGTCTGATTTATCTTCTGATAAAATCTCTAATATGGAAGCTGATTGCTATTGGTGCTTGTCAAAGTTGCTTGATGGTATGCAAGACCATTACACATTTGCTCAGCCAGGAATTCAGAGACTTGTTTTTAAGTTGAAGGAATTGGTCAGGAGGATTGATGAACCTCTTTCAAGACACATGGAGGATCAGGGACTGGAATTTCTTCAGTTTGCTTTCCGCTGGTTCAATTGTCTTCTAATCCGCGAGataCCCTTTCATCTTGTTACACGCCTTTGGGACACATATCTAGCCGAAGGAGATGCCTTACCAGACTTCCTGGTGTACATATCTGCCAGTTTTCTTCTAACGTGGTCAGATAAGCTTCAGAGGCTTGATTTCCAAGAATCAGTGATGTTCCTTCAACACCTTCCGACTCAAAACTGGTCTCACCAGGAGCTTGAAATGGTGCTTTCTCGTGCATATATGTGGCACAGCATGTTCAACAACTCACCTAGTCATTTAGCTAGCTG 1370 0.408 MKNNDHNNREEDQQNKDSTIASLESRFNQTLRNVQGLLKGRSIPGKILLTQRSDLQDNSNSNESSPNYKRSFSYNEARTSGHTAEAVEEEVLSTSKPIGTTNENTLKISTPHLENKSKEVQKSSVGARATDSARVMKFTKVLSETTIILEKLRELAWSGVTDYMRPTVWRLLLGYAPPNSDRREGVLRRKRLEYLDCVSQYYNIPDTERSDDEINMLRQIAVDCPRTVPDVTFFQQQQVQKSLERILYTWAIRHPASGYVQGINDLVTPFLVVFLSEYLKGGIDNWSMSDLSSDKISNMEADCYWCLSKLLDGMQDHYTFAQPGIQRLVFKLKELVRRIDEPLSRHMEDQGLEFLQFAFRWFNCLLIREIPFHLVTRLWDTYLAEGDALPDFLVYISASFLLTWSDKLQRLDFQESVMFLQHLPTQNWSHQELEMVLSRAYMWHSMFNNSPSHLAS 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g02149 456 MobiDBLite consensus disorder prediction 50 81 - -
Bva09g02149 456 Gene3D - 321 456 - -
Bva09g02149 456 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 196 320 - -
Bva09g02149 456 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 3 453 - -
Bva09g02149 456 PANTHER RAB-GTPASE-TBC DOMAIN-CONTAINING PROTEIN-RELATED 3 453 - -
Bva09g02149 456 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 322 444 IPR035969 -
Bva09g02149 456 Pfam Rab-GTPase-TBC domain 163 408 IPR000195 -
Bva09g02149 456 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 136 346 IPR035969 -
Bva09g02149 456 SMART tbc_4 156 412 IPR000195 -
Bva09g02149 456 ProSiteProfiles TBC/rab GAP domain profile. 159 386 IPR000195 -
Bva09g02149 456 MobiDBLite consensus disorder prediction 50 80 - -
Bva09g02149 456 Gene3D - 136 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g02149 Bva-Chr9 17769435 17775620 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g02149 K20360 - qsu:112012707 787.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g02149 09 17769435 17775620 Bva07g02592 07 20460532 20466490 BWGD
Bva09g02149 09 17769435 17775620 Bva09g02149 09 17769435 17775620 ECH